| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1945 |
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| Symbol | |
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| ID | 5712939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2034739 |
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| End bp | 2035683 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267870 |
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| Product | putative permease component of branched-chain amino acid transport system |
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| Protein accession | YP_001533287 |
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| Protein GI | 159044493 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.280306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000756966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATCC TCGACATCCT CCTGTCGGCC AGCTTCTGGG CCGCCGCCAT CCGCATCGCC
AGCCCGCTGA TCTTCGCCAC CATGGGCGAG CTGATCTGCG AACGCGCCGG GGTGCTCAAC
CTCGGGATCG AAGGGATCAT GGTCGCGGGC GCCTTCGCGG GCTGGATGGC GGTCTATACC
GGCACGGACC TGTGGACCGG CGTCGCCGTG GCCTTCGGCG CGGGGATGCT GTTCGGCCTC
CTGCATGCCA CGCTCACCGT CCCCTTCGGC CTGAGCCAAC ACGTGGTCGG CCTCGGCATC
ACGCTGCTGG CGACCTCCGC CACCTATTTC GCCTACCGCG TGGCGCTGCC CGAGGTCTCC
TCCCCCCCGC GGATCGAGGC GTTCCAACCC TACGAGATCC CGCTTCTGTC GGACCTGCCG
CTCCTCGGCC CGGCCCTCTT TTCGCAAACC CCGCTCACCT ATCTCGCTTT CGCCGTCGCG
GGCCTGACCG CTTTCACCCT CTACCGCACG CCGCTGGGCC TGGCCCTGCG CGCCGCGGGC
GAAAACCCCT CCGCCGTCGA GGCCCAGGGC CTGAGCGTCA CCGGCCTGCG CATGGGCGCG
GTCATCGTCG GCTCGGGCCT GATGGCGGTG GGCGGCGCGT TCCTGACCAT GTCGGCCTTC
AACTCGTTCT TCTTCGAGAT GGTCAATGGC CGCGGCTGGA TCTGCATCGC ACTGGTTGTC
TTCGGCGCCT GGCGCCCGGG CAAGGCGCTG CTCGGCGCAC TTCTCTTCGC GGCCTTCGAT
GCCCTGCAAG TGCGGCTGCA ACAGACCGGC CTCGGCGCGG ACATCCCCTA CCAGGTGTTC
CTGATGCTGC CCTATATCCT GTCGATCCTC GCCCTGATCG TCATGTCGCG CCGCGCAGAG
GTTCCCGCCG CCCTGATGGT GCCCTATAAC AAGGGCACCC GTTGA
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| Protein sequence | MEILDILLSA SFWAAAIRIA SPLIFATMGE LICERAGVLN LGIEGIMVAG AFAGWMAVYT
GTDLWTGVAV AFGAGMLFGL LHATLTVPFG LSQHVVGLGI TLLATSATYF AYRVALPEVS
SPPRIEAFQP YEIPLLSDLP LLGPALFSQT PLTYLAFAVA GLTAFTLYRT PLGLALRAAG
ENPSAVEAQG LSVTGLRMGA VIVGSGLMAV GGAFLTMSAF NSFFFEMVNG RGWICIALVV
FGAWRPGKAL LGALLFAAFD ALQVRLQQTG LGADIPYQVF LMLPYILSIL ALIVMSRRAE
VPAALMVPYN KGTR
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