| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1939 |
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| Symbol | |
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| ID | 5712933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 2028410 |
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| End bp | 2029231 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267864 |
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| Product | putative ABC transporter permease protein |
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| Protein accession | YP_001533281 |
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| Protein GI | 159044487 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000752264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCTATG TCCCCGATCC CTTGCCCCGC GACAGCCGTG GCCAGAGCCT TGTGAAAACC
CTGACCTCCC GCGCGGTGCT GGCCCCCCTG GGGGCGGTCA TCGTGTTCCT GCTGTTCTGG
GAAGGGCTGG TCTGGATCAA CGACTGGCCG AATTTCGTCA TGGCCTCCCC CTCGGACCTG
CCGCCCGCCT ATGCCCGCTA CTGGGAGCTG TTCCTCATCA TGGGGTGGCA GACGCTCTGG
CGCACGGTGG TGGGCTTGTT GCTCGCCGTG GTGGTGGGCG TCGGCATCGG GATGCTCATG
GGCTTTTCGC GGGTGATGCG CGACGCGCTC TATCCGCTGC TCGTGGGGTT CAACGCGATC
CCCAAGGCGA CCGTTGTGCC CATCGTCGCG CTTCTCTTCG TGGGCCAGCA CGATTTCAAC
ACGATTCTGA TCGCCTTCAT GATCTCGTTC TTCCCCATCG CGGTCTCGAT CTCCATCGGC
CTGTCCACGC TGGAGCCGGA ATACCGCGAC ATCCTCCGGT CACTTGGCGC CTCCAAGACC
ACGATCTTCT GGAAGATCGC CCTGCCGAAA ACCCTGCCGG AGTTCTTCGG CGCCCTGAAG
GTCTCCGTCA CGCTCGCCTT CATCGGCACC AACCTGATGG AAATCGTCTC CCCCCATGGC
CGCGGCCTCG GCGCGCTGTT CGACAGTGGC AAGACGAACT CCGACTACCC GCTGATGTTC
GCGGTGCTGA TCGCCTTGGC CTTCCTCGGC ATCGTGCTCT ACTACATCGT GGTGGCGCTG
GAGCGGATCT TCGCCGGCTG GGCCGAACGC GCGGAAAGCT GA
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| Protein sequence | MAYVPDPLPR DSRGQSLVKT LTSRAVLAPL GAVIVFLLFW EGLVWINDWP NFVMASPSDL
PPAYARYWEL FLIMGWQTLW RTVVGLLLAV VVGVGIGMLM GFSRVMRDAL YPLLVGFNAI
PKATVVPIVA LLFVGQHDFN TILIAFMISF FPIAVSISIG LSTLEPEYRD ILRSLGASKT
TIFWKIALPK TLPEFFGALK VSVTLAFIGT NLMEIVSPHG RGLGALFDSG KTNSDYPLMF
AVLIALAFLG IVLYYIVVAL ERIFAGWAER AES
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