Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1921 |
Symbol | |
ID | 5712915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 2006027 |
End bp | 2007346 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267847 |
Product | histidine kinase |
Protein accession | YP_001533264 |
Protein GI | 159044470 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000693193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000000506219 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCGTT GGCTCAAGAA TTCTCTTCCC CGGCGTCTCT ACGCGCGCGC CGCCCTGATC CTCATCCTGC CGATTGTGAC GATTCAATTG GTGGTGTCGA TCACCTTTTT GCAGCGCCAT TTCGAGGACG TGACCCGGCA GATGACGCGC TCGGTGGTGA TCGAGGCGCG CCTGCTGCGC GAGACGATCG AAACCGAGGG CCTGCTGCGG GCGCAGCATC TGGCACGGGC GCTGCGGATT TCCCTGGCCC CGCTCGATGC GGCCCCGCCG GTGGAAAACC GGCGCCTGTT CTATGATGTC TCGGGCCGCA CGGTGATCGA GGTTCTGCGC GGGGAGCTGG ACGGGGTCGG TCTGCTGGAT CTCGAGGATA ACGACCGGGC GCTGCGGTTC AGCCTGGACA CCGAGGTCCT GCCGGTGATG ATCGAGCTGG ACCGGCGTCG CGTGTCGGCC TCCAACCCGC ATCAGCTGCT GGTGCTGATG ATCCTTGTCG GGGTGCTGAT GACGGTGGTG GCCTATATCT TCCTGCGCAA CCAGTTGCGG CCGATTGCCC GGCTTTCCAA GGCTGCAGAG GCCTTCGGCA AGGGGCGCGT GGTGCCCTAC AAGCCCTCGG GCGCACTGGA GGTCCGCGCC GCGGGCCATG CCTTCCTCGA AATGCGCGCC CGGATCGAGC GTCAGATCGA ACAGCGCACC ATGATGCTGT CGGGGGTGAG CCACGATCTG CGCACGCCGC TGACCCGGAT GCAGCTGGAA CTGTCGATGC TGCCCCCCTC GCCCGAGGTC GCCGCGCTGG AACAGGACGT GCAGGACATG TCGCGGCTGC TGACCACGTT TCTGGATTTC GCCCGGGCCG ATGCGCTGGA GGATGCGAGG CTGGTCAACC CGCTCGACCT GGTCGAGGGG ATCGTGGATC AGTACAAACG CACGGGCGGC AAGGTCAGCT TCACGCGGCC GGCCCTGCCC GAAGGCGCCC CCGAGCCGCA GGTATCCCTG CGCCCAATGG CGCTGGAGCG CGCGCTCGAC AACCTGGTCG GCAATGCCCT GCGCTACGGC ACCCATGCGC AGGTCTCGGT GGATCTCTTC CAGGCTGCGG TGCGGTTCTC GGTCGAGGAT GACGGCCCGG GCATCCCGCC CGATCAGCGC GGCCAGGCGC TCAAACCCTT CGCGCGGCTC GATGCCGCCC GTAATCAGAA CGCCGGGACC GGCGTCGGGC TCGGGCTGGC CATTGCCGCG GATGTCGCGC GCAGCCACGG GGGCGCGCTG CGGCTGGGTG TTTCGGACAA GCTCGGCGGT CTCAAGGCCG ATCTTTTGAT TGCACGGTAA
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Protein sequence | MFRWLKNSLP RRLYARAALI LILPIVTIQL VVSITFLQRH FEDVTRQMTR SVVIEARLLR ETIETEGLLR AQHLARALRI SLAPLDAAPP VENRRLFYDV SGRTVIEVLR GELDGVGLLD LEDNDRALRF SLDTEVLPVM IELDRRRVSA SNPHQLLVLM ILVGVLMTVV AYIFLRNQLR PIARLSKAAE AFGKGRVVPY KPSGALEVRA AGHAFLEMRA RIERQIEQRT MMLSGVSHDL RTPLTRMQLE LSMLPPSPEV AALEQDVQDM SRLLTTFLDF ARADALEDAR LVNPLDLVEG IVDQYKRTGG KVSFTRPALP EGAPEPQVSL RPMALERALD NLVGNALRYG THAQVSVDLF QAAVRFSVED DGPGIPPDQR GQALKPFARL DAARNQNAGT GVGLGLAIAA DVARSHGGAL RLGVSDKLGG LKADLLIAR
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