Gene Dshi_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1915 
Symbol 
ID5712908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1998356 
End bp1999138 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID641267840 
Producthypothetical protein 
Protein accessionYP_001533258 
Protein GI159044464 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.436221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000650109 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTTTTG ACGCTCTCAT CCCTTGGGCG GAAGACCTTG AGCGCCGGCT CGATCCCGTC 
TCGCGCCTCA CGCACTGGAT GGGGCACGCG CCCGATCCCT GGCAGGTCGA GGCGTTCACC
ACCCGGGCGA CTGAGGTTGC GCTGCGGGTT GGGCGTCAGT CGGGTAAGAC ATCGGTTCTC
GCCGCGCGAG CGGTCGAGGA ATTGCATGTG CCGGAATCGC TGACCTTGTG TGTCGCACCT
GCCGAGCGGC AGGCGAAAAT CATCGCCCGC GAGATTGGGC GGCAGTTGCA GCGGACATCG
CTTGTGATCA ACCGCCCAAC TCAAACCGAA CTGGAGATCG CAAACGGCGC GCGGGTCATT
GCGCTGCCAT CGACCTCGGA CACGATCCGG GGCTTTCCTG CGGTGTCCTG CCTGATCATC
GACGAATGTG CCTTCCTGCA AGGCGACGGA GGCGGCGAAG ACCTGATTTC ATCCGTGCTG
CCAATGCTTA CCGAAGACGG GCAGGTGTTC TTCAGCAGCA CACCCGCAGG CAAGAACAAC
TATTTCGCCC GGCTGTTCCT TGATGCGAAG CCGGGTGACG GTATCCACCG CATCGTTGTG
CGCGGGACGG ACATTCCGAG GCTGGCGGAC AAGGTGGAGC GGATGCGCCG CACGCTCTCC
GCGACGAAGT TTCGGCAGGA AATTTTGGTC GAAATGCTGG CCGACGGTCA GGCGTATTTT
GACCTCTCTA TCATCGAACA GGCCACCAGC AAGACGGAGA AGGCAATATG TCCGAGGCTG
TAA
 
Protein sequence
MPFDALIPWA EDLERRLDPV SRLTHWMGHA PDPWQVEAFT TRATEVALRV GRQSGKTSVL 
AARAVEELHV PESLTLCVAP AERQAKIIAR EIGRQLQRTS LVINRPTQTE LEIANGARVI
ALPSTSDTIR GFPAVSCLII DECAFLQGDG GGEDLISSVL PMLTEDGQVF FSSTPAGKNN
YFARLFLDAK PGDGIHRIVV RGTDIPRLAD KVERMRRTLS ATKFRQEILV EMLADGQAYF
DLSIIEQATS KTEKAICPRL