Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1915 |
Symbol | |
ID | 5712908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1998356 |
End bp | 1999138 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641267840 |
Product | hypothetical protein |
Protein accession | YP_001533258 |
Protein GI | 159044464 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.436221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000000650109 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTTTTG ACGCTCTCAT CCCTTGGGCG GAAGACCTTG AGCGCCGGCT CGATCCCGTC TCGCGCCTCA CGCACTGGAT GGGGCACGCG CCCGATCCCT GGCAGGTCGA GGCGTTCACC ACCCGGGCGA CTGAGGTTGC GCTGCGGGTT GGGCGTCAGT CGGGTAAGAC ATCGGTTCTC GCCGCGCGAG CGGTCGAGGA ATTGCATGTG CCGGAATCGC TGACCTTGTG TGTCGCACCT GCCGAGCGGC AGGCGAAAAT CATCGCCCGC GAGATTGGGC GGCAGTTGCA GCGGACATCG CTTGTGATCA ACCGCCCAAC TCAAACCGAA CTGGAGATCG CAAACGGCGC GCGGGTCATT GCGCTGCCAT CGACCTCGGA CACGATCCGG GGCTTTCCTG CGGTGTCCTG CCTGATCATC GACGAATGTG CCTTCCTGCA AGGCGACGGA GGCGGCGAAG ACCTGATTTC ATCCGTGCTG CCAATGCTTA CCGAAGACGG GCAGGTGTTC TTCAGCAGCA CACCCGCAGG CAAGAACAAC TATTTCGCCC GGCTGTTCCT TGATGCGAAG CCGGGTGACG GTATCCACCG CATCGTTGTG CGCGGGACGG ACATTCCGAG GCTGGCGGAC AAGGTGGAGC GGATGCGCCG CACGCTCTCC GCGACGAAGT TTCGGCAGGA AATTTTGGTC GAAATGCTGG CCGACGGTCA GGCGTATTTT GACCTCTCTA TCATCGAACA GGCCACCAGC AAGACGGAGA AGGCAATATG TCCGAGGCTG TAA
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Protein sequence | MPFDALIPWA EDLERRLDPV SRLTHWMGHA PDPWQVEAFT TRATEVALRV GRQSGKTSVL AARAVEELHV PESLTLCVAP AERQAKIIAR EIGRQLQRTS LVINRPTQTE LEIANGARVI ALPSTSDTIR GFPAVSCLII DECAFLQGDG GGEDLISSVL PMLTEDGQVF FSSTPAGKNN YFARLFLDAK PGDGIHRIVV RGTDIPRLAD KVERMRRTLS ATKFRQEILV EMLADGQAYF DLSIIEQATS KTEKAICPRL
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