| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1903 |
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| Symbol | |
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| ID | 5712896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1986343 |
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| End bp | 1987356 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267828 |
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| Product | putative alginate biosynthesis protein algJ |
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| Protein accession | YP_001533246 |
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| Protein GI | 159044452 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0827588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000024622 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGTCCA TCACCGACAA GATCAGTACC CTGGCCCTTG CCACCGCCGT GGCGGGCGTG
TCCCTGACCT CCTTCGCCCA GGTCGATCTC GGCAACTGGC AAACCGGGTG GCGCACGGGT
CTTTACCAGC GCGGCTTCGA GGACCGCTTC ACCGACGGGA TCGCCACACG GGACCACGCG
GCCGCGCTTT GGGCCGCCCT GCGCTGGGAG GTGTTCGACG AGACCGCCGA GGGCGCGATC
AAGGGGCGGG ACGGATGGCT CTTCACCCGC GAAGAGTTCA TCGAACCCGC ACCGTCGCGC
GACCTCGACG CCGAACTGCG CCGCGTGGCC CAAACCCTGC GCGGGCACGG CATCGACCTG
ATCCCGGTGA TCGTACCCGA CAAGGCCCGG ATGCAGGCCG ACCGCCTGCC ACGCAGCCGG
TCCGAGGGGT TTGCCCTGCG CCTCGATCGC GCCCTCGGCA GCGTCGCGGC AGCCGGGTTG
CCGGTTATCG ACCTGCGCCC GGCGCTGTCG ATCCGCGACG GATACATGCG CACAGACACC
CATTGGAGCC CCCGGGGCGC GCGGGCCAGT GCCTTGGCAA TTGCCGCCGC TTTGCAGGAC
CGCGCACTCC CACGGGCCGC CGTCACCACG ACCGTGACCG GCGTGGTGCC CTTCGAAGGC
GATCTCACGG TTTTTGCCGA TACGGGCCCC TGGCGGCCCT GGATCGGCCC CGCGCCGGAG
GTCATCGAAA CCTTCGAAAC CCGGGTGGAC GCCGCCGAGG ACCTCTTTGG CGAAGCGGTC
CTTCCTGTCG CCCTGGTCGG GACGAGCTTC TCCGCCAAGC CCGCGTTCCA TTTCGAGGGG
TTCCTGAAGG ACGCCCTGCA AGCGGATGTC CTGAACGCCA GCCGCATTGG ACTAGGGCCC
TTCGTGCCCA TGGACGATTT TCTGGCCGAT ATCGGCGATC TCGCCTCTCT GCCAACCCTC
GTGATCTGGG AAATCCCGGA ACGGTACCTG ACAAGTCGGA GCCTTACACA ATGA
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| Protein sequence | MESITDKIST LALATAVAGV SLTSFAQVDL GNWQTGWRTG LYQRGFEDRF TDGIATRDHA
AALWAALRWE VFDETAEGAI KGRDGWLFTR EEFIEPAPSR DLDAELRRVA QTLRGHGIDL
IPVIVPDKAR MQADRLPRSR SEGFALRLDR ALGSVAAAGL PVIDLRPALS IRDGYMRTDT
HWSPRGARAS ALAIAAALQD RALPRAAVTT TVTGVVPFEG DLTVFADTGP WRPWIGPAPE
VIETFETRVD AAEDLFGEAV LPVALVGTSF SAKPAFHFEG FLKDALQADV LNASRIGLGP
FVPMDDFLAD IGDLASLPTL VIWEIPERYL TSRSLTQ
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