| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1896 |
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| Symbol | algD |
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| ID | 5712889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1976442 |
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| End bp | 1977851 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267821 |
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| Product | GDP-mannose 6-dehydrogenase |
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| Protein accession | YP_001533239 |
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| Protein GI | 159044445 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.883945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0307058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGATA TCGCCGCGTT CGATCGCGCC CGTGCAGGCC TTGTCGCTGC GCAACCCGTC
CCGCCGAAAG CGGCCATTTC CGTGGTTGGC TTGGGCTATG TAGGGGCGGT CTCGACCGCC
TGCCTGTCCA GCCTCGGGCA CGAGGTCGTG GGCGTGGATA TCGACCTGGC CAAGGTGGCC
GACATCGCCG CAGGCCGTGC CCCGATCCAC GAAAGGGATC TTGGCAGCCT TCTGCAGCAG
GGGGTTTGCA AGGGGTTGAT CACGGCTACG GACGACCTTG CCGGGGCGGT ACGGGACACC
GATGTGACCT TCGTATCCGT GGGCACACCG ACCGCGCCGG ACGGCGGCTG CGACTACCGG
TTCATCGAGG CCGCAGCGCG CTCCATGGCC GAAGGCTTGA AGGTAAAACC GGGGTTCCAC
GTCTTCGTGA TGCGCTGCTC GATCCCGCCG GGGACCACGA TGAAGGTGAT GACACCGATC
CTGGAAGAGC TCTCCGGCAA GAAACTGGGC ATGGATTTCG GGGTTGCCTT CAACCCCGAG
TTCCTGCGCG AAGGCGTGGC GGTGGCGGAT TTCTACGCGC CGCCCAAGAC GGTCATCGGC
GCGACCTGCG ACCAGACGGC GGATGTGTTG CGCCGGATCT ACGCGCCGGT AGACGAGGCG
CCGATCCTGA CCTCGATCGA GACCGCCGAG ATGGTGAAAT ACGTCGACAA TGTATGGCAT
GCAACCAAGG TATGTTTTGC CAACGAAGTC GGGCGCTTGG CGAAGTCTCT TGAGGTGGAC
AGCCACGCGG TGATGGATGT CTTCTGCCGC GATACCAAGC TTAATCTTTC ACCCTATTAC
CTCAAGCCCG GTTTCGCCTA TGGCGGCTCT TGCCTGCCCA AGGAGGTCCG CGCGGTCGCC
CATATCGCCA AGGCCCAGGG CGTCTGCCTG CCGATGATCG AGAACCTCGG CGCGTCCAAC
CGTGCCCAGA TCGACAGCGC CATCCGCCTC GCGCGCGACA CCGGCGCGAG GCGGATCGGA
ATTCTCGGCC TCGCCTTCAA GCCCGGCACA GATGATCTCC GCGAAAGCCC GATCCTCGAA
GTGATCGCCG CCTTGCGTGC CGAGGGCATC GAGATCCTGA TCCACGACCC CGCCATCACC
CGCGACACCG CCATCGAAAG CCAGCTGGGC TATGTCCGCC ACGGCAGCCC CGGCCTTGCC
GCTCTTGCGG GCGAGTTGCG CGGTTTTCTG GTGGATGACC CGCGCGAGGT CGCCCGGCGG
TCCGACGCCA TCATCGTGAC ACAGCGCAAC CTGGTCTACT CGGAGATCGT CCAGATGGCC
TCCGAAGACC TCCAGACCCC CATCATCGAC GTGGTGCGTC TCTATGACGA GTGCCCGAAA
ATCGCGACCT ATCGCGGCAT CGGCTGGTGA
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| Protein sequence | MLDIAAFDRA RAGLVAAQPV PPKAAISVVG LGYVGAVSTA CLSSLGHEVV GVDIDLAKVA
DIAAGRAPIH ERDLGSLLQQ GVCKGLITAT DDLAGAVRDT DVTFVSVGTP TAPDGGCDYR
FIEAAARSMA EGLKVKPGFH VFVMRCSIPP GTTMKVMTPI LEELSGKKLG MDFGVAFNPE
FLREGVAVAD FYAPPKTVIG ATCDQTADVL RRIYAPVDEA PILTSIETAE MVKYVDNVWH
ATKVCFANEV GRLAKSLEVD SHAVMDVFCR DTKLNLSPYY LKPGFAYGGS CLPKEVRAVA
HIAKAQGVCL PMIENLGASN RAQIDSAIRL ARDTGARRIG ILGLAFKPGT DDLRESPILE
VIAALRAEGI EILIHDPAIT RDTAIESQLG YVRHGSPGLA ALAGELRGFL VDDPREVARR
SDAIIVTQRN LVYSEIVQMA SEDLQTPIID VVRLYDECPK IATYRGIGW
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