Gene Dshi_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1891 
Symbol 
ID5712884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1968779 
End bp1969207 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content63% 
IMG OID641267816 
Productputative flavohemoglobin 
Protein accessionYP_001533234 
Protein GI159044440 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.106572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.152272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCG ATGCTTCTCT TCGCGTACAA AACACCTGGG CCCTCGTGGC GCCGATCTCG 
GACCAGGTGG GCGATCTGTT CTATGCCAAC CTGTTCCGGA TGGACCCGAC GACCAAGCCG
CTCTTTGCGG GCAACATCGA CCTGCAGGGG CGCAAGCTTG TGCAAACGCT GGGCTTTATC
GTCGATCACC TCGAAGACCC GGACCGGCTG TTGCCCGCTG CGCAGGAGTT GGCCGTTCGG
CATGTGAGCT ACGGGGTGAC GCGCACGCAA TACGCCTCTG TCGGGGCCGC GTTGGTGAAG
TCGCTTCGGC AACTGCTCGG AACGGCGTTC TCGCCGGAAG ATGAAGCCGC CTGGGCAGAG
GTCTATGGCG GGCTGTCGGC GGCGATGATC GCGGCGGCCT ATCCCGATAC CTCCTATACG
AAGGTATAG
 
Protein sequence
MPTDASLRVQ NTWALVAPIS DQVGDLFYAN LFRMDPTTKP LFAGNIDLQG RKLVQTLGFI 
VDHLEDPDRL LPAAQELAVR HVSYGVTRTQ YASVGAALVK SLRQLLGTAF SPEDEAAWAE
VYGGLSAAMI AAAYPDTSYT KV