| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1886 |
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| Symbol | |
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| ID | 5712878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1963398 |
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| End bp | 1964177 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267810 |
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| Product | putative Exodeoxyribonuclease III |
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| Protein accession | YP_001533229 |
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| Protein GI | 159044435 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0111436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.144129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG CGACATTCAA CATCAACGGG ATCAAGGCCC GGATCAACGC CCTGCCGGAC
TGGCTGCGTG AGGCCAGCCC CGACGTCGTC GTCCTGCAAG AGATCAAATC CGTCGACGCG
GCCTTCCCAC GGGAGCTGTT CGAGGACATG GGCTACACCG TCGAAACCCA CGGCCAGAAG
AGCTTCAACG GCGTCGCCAT CCTGTCGAAA CTCCCGCTGG AGGATGTCAC CCGCGGCCTG
CCCGGCGATG ACGGCGACGA ACAGGCCCGC TGGATCGAGG CGACCGTGAT GGGCGACGTG
CCCGTGCGCG TCTGCGGGCT CTACCTGCCC AATGGCAACC CCGCGCCGGG GCCGAAATAC
GACTACAAAC TGGCCTGGAT GGCCCGGCTG AAGACCCGCG CGGCGGAACT TCTGGCGGCC
GAGGAACCGG CCCTCATGGC GGGCGACTAC AACATCATTC CCCTGGACGA GGACGCCGCC
CGCCCCGAAG CCTGGCGCAA GGATGCGCTG GCGCTGCCCG CCTCGCGCGC GGCCTTCCGC
GAGATCCTGA ATCTCGGCTT CACCGACGCG TTCCGCACCC GCGTGCCCGG GCCGGGGCAT
TACTCGTTCT GGGATTACCA GGCCGGCGCC TGGCAGCGCA ATGACGGCAT CCGGATCGAC
CATATCTTGA TGACGCCGGA CTGCGCGGAC CTGATGCGGG ACTGCCGGAT CGACGCGGCC
GTGCGCGGCG GCGAAAAGCC GTCCGATCAC GTGCCCGTGG TGGTGGACCT GGCGGCCTGA
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| Protein sequence | MQIATFNING IKARINALPD WLREASPDVV VLQEIKSVDA AFPRELFEDM GYTVETHGQK
SFNGVAILSK LPLEDVTRGL PGDDGDEQAR WIEATVMGDV PVRVCGLYLP NGNPAPGPKY
DYKLAWMARL KTRAAELLAA EEPALMAGDY NIIPLDEDAA RPEAWRKDAL ALPASRAAFR
EILNLGFTDA FRTRVPGPGH YSFWDYQAGA WQRNDGIRID HILMTPDCAD LMRDCRIDAA
VRGGEKPSDH VPVVVDLAA
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