Gene Dshi_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1862 
Symbol 
ID5712854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1940803 
End bp1941114 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content54% 
IMG OID641267786 
Producthypothetical protein 
Protein accessionYP_001533205 
Protein GI159044411 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.833098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.522722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGACG GGGTCGATTT CAGCCATGCA AATATGGTGA GGGTGGATGC GCACGATGCC 
AAGCTGAACA GGGCACGGCT GATTGGTGCT AATCTGCGCG GTGCCAACCT TACCGGTGCG
GAGTTGGTCG GCGCAGATTT TACAGGGTCG AACCTCGAAA ATGCAATTTT GCATGGTGCC
GATATTAGTG GCGCAAACTT CACCAAAACC ACCGGGCTAA CTCACGAAAT GCTGGGCGCA
GCCATCGGCA GTCAAGACAC GATCCTTCCG GAAGGTTTTG TCTTTCCGCA AGACTGGATG
CTGACCACCT GA
 
Protein sequence
MADGVDFSHA NMVRVDAHDA KLNRARLIGA NLRGANLTGA ELVGADFTGS NLENAILHGA 
DISGANFTKT TGLTHEMLGA AIGSQDTILP EGFVFPQDWM LTT