Gene Dshi_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1844 
Symbol 
ID5712836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1925279 
End bp1925812 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content70% 
IMG OID641267768 
Producthypothetical protein 
Protein accessionYP_001533187 
Protein GI159044393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.35393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGA TATGGATCGC CGCGCTGGCG GCCCTGCCCC TCTCGGCCTT CGCGGCCGGA 
GGCGAGATTT TCGCACCGCC GGTCAAGACC GACACCACCA CCACCTGCAC AGGTCCGATG
ATCTGGGACG CTGCGCTGGA GCGGTGCGTG CGCGCGGACC AGAGCCACCT GTCCGATGAC
GACCGGCACG ACGCCGTGCG CGAGCTGGCC TATGCCGGGG CCTACGACCG GGCGCTCGCG
ATTTTGGCGC GCTTTGACGA TCCGGGCGAC GTGCGGGCGC TGACCTACCG GGGGTTCGTG
GCGCGCATGA CCGGGGACAT GCCCGCTGCG ATGGACTATT ACCTTGCCGC TCTGGCCGCG
GATCCCGACT ATCACCCGGC GCGGTCCTAC ATGGCGCAAG GCCTTCTGGC CGCGGGGGAC
CGCGCCGGGG CGCGGACCGA ACTGCGCGAA ATCAGGGCCC GTGGCGGGCG GGAGACCTGG
GCGGCGTTCT CCCTCGCACA GGCATTGCGC AGCAACAGCG GCTATGCCTA CTGA
 
Protein sequence
MRLIWIAALA ALPLSAFAAG GEIFAPPVKT DTTTTCTGPM IWDAALERCV RADQSHLSDD 
DRHDAVRELA YAGAYDRALA ILARFDDPGD VRALTYRGFV ARMTGDMPAA MDYYLAALAA
DPDYHPARSY MAQGLLAAGD RAGARTELRE IRARGGRETW AAFSLAQALR SNSGYAY