| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1835 |
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| Symbol | |
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| ID | 5712826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1914712 |
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| End bp | 1916187 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267758 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001533178 |
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| Protein GI | 159044384 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.752029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.359008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAC CTCGTATCGC GGCGGATGTC TTCTTTCTCG ACCGGACGAC CAACAGACCG
CTGCAAACCC AGATTCGCGA AACCGTCGTG GCGTCGATCC TGTCCAAGCA GGCGTTGCCG
GGGGCGCTGA TGCCGTCCTC GCGCAAGCTG GCCGCGCATC TCGGGGTCGC GCGGATGACC
GTCACCCTGG CCTTTCAGGA GCTGGTCTCG CAGGGCTATC TCGAAGCCCA CAGCCGCAGC
GGCTACCGTG TGGCCGACAC CGAGACCCTG TCGCTGCTGC CCGTGGGGAC CGAGGCCGAA
CCGGTCGACA ACAGTGCGCT TTGGCGCAAC GTGCTGTCGG AGAACCTGCG CGCCCGGCGC
CGGGTGATCA AGCCGAAGGA CTGGCGCGCC CTGCCCTACC CGTTCGTTTT CGGCGAGATG
GACACCAGCC TGTTCAATCA CACCGCCTGG CGCGAATGCG TCCGGCAGGC GATGGGCACG
CGGGATTTCG ACCTGATGGC CAGCAACGAG GCCACCGACG ACCCGCTCCT GGTCGACTAC
ATCCTGTCGC GGATGTTGCC GCGGCGGGGG ATCACGGCCA CGCGCGACCA GGTGCTGATC
ACCGTTGGGG CGCAGAATGC CCTGTGGCTG GCGATCGAGC TTCTGACCCG CGCGCCGCTG
AAGGCGATCT GCGAGAACCC GTGCTATCCC GACACGCTGC AGGCGCTGCG CTGGTGCGGG
GCGGAGGTCA CGACGGTGGA TGTGGACCGC GACGGGCTGG TGCCGCAGGA CATTCCCGCG
GGCACCCAGG CGGTGTTCGT CACCCCCAGC CACCATGCCC CCACGGGCGC CACGCTGACG
CGGGCACGGC GCGAACGGCT GCTGGAGATG GCGCAGGCGC GCGATTTCAT CGTCGTGGAG
GACGATTACG AGTTCGAGAT GAGCTTTCTC GAACCGCCGA GCCCGGCGCT GAAGGCGATG
GACCGGCATC AGCGCGTGCT CTATGCGGGC AGCTTTTCCA AGGCGATGTT TCCGGGGCTG
CGGCTGGGCT ACCTGGTTGG TCCGGCGCCG GTGATCGCCG AGGCGAAGGA GTTGCGCACG
ATGATGCTGC GCCATCCGCC CGGGCATCTG CAGCGCACGG CGGCCTATTT CCTGGCGCAG
GGTCACTACG ATCTGCTCAT GCGCGACATG CGGCGGGAGT TCGCCAAGCG CCGCATGGCC
GCGGTGGAGG CGTTGGACGG AACCGCCCTG GAGATGGTGG GTGCGGCCCG GTTCGGGGGC
ACGAGCCTGT GGATCAAGGC GCCGGACGGG GTCGATACCG TGGCGCTGGG TCAAGCGCTG
CTGCGCGACG GCGTGGTGAT CGAGCCGGGT GCGCCGTTCT TCAGCGGCCC GGACCAACCG
ACGGAATTCT TCCGGCTGGG CTATTCCTCG ATCCCGGCGG ACCGGATCGC CGAAGGGATC
CGCCGGATCG ACGCCAAGGT TGCGGAGTTC TGCTAG
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| Protein sequence | MAKPRIAADV FFLDRTTNRP LQTQIRETVV ASILSKQALP GALMPSSRKL AAHLGVARMT
VTLAFQELVS QGYLEAHSRS GYRVADTETL SLLPVGTEAE PVDNSALWRN VLSENLRARR
RVIKPKDWRA LPYPFVFGEM DTSLFNHTAW RECVRQAMGT RDFDLMASNE ATDDPLLVDY
ILSRMLPRRG ITATRDQVLI TVGAQNALWL AIELLTRAPL KAICENPCYP DTLQALRWCG
AEVTTVDVDR DGLVPQDIPA GTQAVFVTPS HHAPTGATLT RARRERLLEM AQARDFIVVE
DDYEFEMSFL EPPSPALKAM DRHQRVLYAG SFSKAMFPGL RLGYLVGPAP VIAEAKELRT
MMLRHPPGHL QRTAAYFLAQ GHYDLLMRDM RREFAKRRMA AVEALDGTAL EMVGAARFGG
TSLWIKAPDG VDTVALGQAL LRDGVVIEPG APFFSGPDQP TEFFRLGYSS IPADRIAEGI
RRIDAKVAEF C
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