| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1810 |
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| Symbol | |
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| ID | 5712798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1886324 |
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| End bp | 1887496 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641267730 |
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| Product | putative major facilitator superfamily transport protein |
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| Protein accession | YP_001533153 |
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| Protein GI | 159044359 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.521814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.460294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATG CCGTCCCCTC CGTGACCGAC TGGCCGCGCG TTCTCCTTCT GTGGGGCGCG
GGGCTGGGGG CGGCGGCGCA ATACGGCAAG GTGTCGGTGA TCTTCGACCG CCTGCCCGCG
CTGTACCCGG AGGCCGGGGC GCTTCTGGGT TGGGCGGTCT CGCTGGTCGG CGGGGTGGGG
ATCGTGCTGG GCATCACCGC GGGGATCGTG GTCGCGCGCC TGACCCTGCG GCGCGCGCTG
ATCTGGGCGC TGTGGCTCGG GGCGGCGATG TCGCTGCTGC AGGGGCTGGC GCCGCCGCTG
TGGCTGTTTC TCGCCTCGCG CCTGGTGGAG GGGGCGTCGC ATCTTGCCAT CGTGGTCGCG
GCCCCGACCC TGATCGCCAG CCTCAGCGCG GAGCGCGACC GGGGGCTGAC CCTGACCCTG
TGGGGGACGT TTTTCGGGGT GGCCTTTGCC ATTCTCAGCT GGGCGGGCCT GCCACTGGTG
GACCGGGCCG GGGCGCCCGC GCTGTTTCTG GCCCATGCGC TGTTCATGTC CGCTGCCGCG
CTGGCGCTGT CGCGGTCCTT GCCGGAGGTG CCCACCGGGC CGGTGCCGCC CCTGCCGGGA
CTGGGCGCGC TGGCGCGGCA GCATTTGGCG ATCTACCGCT CCCCGCGGCT GTCGGCCCCG
GCGGCGGGGT GGCTGTTCTA TACCTTCTGT TTCGTGTCGC TGCTGACGCT GCTGCCGGCT
TACCTGGACC CGGGCCAGCG CGCCTTCCTG ATCGGGGCGA TGCCGCTGCT GAGCATTGCC
ACCTCGATGA CCCTGGGGGT GTGGATGCTG CGGCGGATGT CGTCCATCGC GGTGATCCAG
ATCGGGTTCC TGGCCTCGGC AGCTTGCGCG CTGGCCCTGC TGGCCGTGCC CGGATCGCCC
GCGATCTGCC TTGCGTTCGC GGCCGCGCTC GGGCTGGTGC AGGGGGCGAG TTTTGCCGCC
GTGCCGGACC TGAACCCCGG GGCGCAGGAC CGCGCGCTGG CCAATGGGGC CATGGCCCAG
ACCGGCAATA TCGGCAACAC GCTGGGCACG CCGGTCCTGT TCGCGCTGGC GAGCCTGGGC
GGGCACGGGG TGATGATGGC GACGCTCTGC GCGCTGTTGC TGGCGGGGGC GGCGGCCCAT
TGGGGGCTGC ACCTGGCGCG ACGCGCCGCC TGA
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| Protein sequence | MTHAVPSVTD WPRVLLLWGA GLGAAAQYGK VSVIFDRLPA LYPEAGALLG WAVSLVGGVG
IVLGITAGIV VARLTLRRAL IWALWLGAAM SLLQGLAPPL WLFLASRLVE GASHLAIVVA
APTLIASLSA ERDRGLTLTL WGTFFGVAFA ILSWAGLPLV DRAGAPALFL AHALFMSAAA
LALSRSLPEV PTGPVPPLPG LGALARQHLA IYRSPRLSAP AAGWLFYTFC FVSLLTLLPA
YLDPGQRAFL IGAMPLLSIA TSMTLGVWML RRMSSIAVIQ IGFLASAACA LALLAVPGSP
AICLAFAAAL GLVQGASFAA VPDLNPGAQD RALANGAMAQ TGNIGNTLGT PVLFALASLG
GHGVMMATLC ALLLAGAAAH WGLHLARRAA
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