Gene Dshi_1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1807 
Symbol 
ID5712795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1881214 
End bp1881651 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID641267727 
Productputative universal stress protein 
Protein accessionYP_001533150 
Protein GI159044356 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.317331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA AAATCGTTGT CGGATTGGAT GGTAGCCAAT CCGGGGAGCG CGCGCTGACC 
TACGCACAAG GGTTGGCGCA GCGTCTTGAA AGTTGTGAAA TCATCGTCGC GTTCATCATC
GAATGGTCGC CATACACCTT CCAGACCGCC GAAGAGAACG CACAGCGCCA CAAGCGCCGC
GAGGAAGAGA TCTCAACCGC CCGCGCGCGG GTGGTGGACC CGGCGGTCAA GGCCCTGAGC
GCGGCGGGAT TTGCCGCCAC GGGCGTGGTG CGCCACGGGG ATGTGGCCGA TCTTCTGGAC
AAGATCGCCA AGAAGGACGG CGCGGAACAG ATTGTCGTGG CCCGAAGTTC CGAGGGCGGT
TTCGTCAACC GCGTCTTCGG CACCTCGACC GTCAATCTCG TGCTGCATGC CAGCGTCCCC
GTCACCGTCG TCCCGTGA
 
Protein sequence
MTSKIVVGLD GSQSGERALT YAQGLAQRLE SCEIIVAFII EWSPYTFQTA EENAQRHKRR 
EEEISTARAR VVDPAVKALS AAGFAATGVV RHGDVADLLD KIAKKDGAEQ IVVARSSEGG
FVNRVFGTST VNLVLHASVP VTVVP