Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1807 |
Symbol | |
ID | 5712795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1881214 |
End bp | 1881651 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641267727 |
Product | putative universal stress protein |
Protein accession | YP_001533150 |
Protein GI | 159044356 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.317331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCA AAATCGTTGT CGGATTGGAT GGTAGCCAAT CCGGGGAGCG CGCGCTGACC TACGCACAAG GGTTGGCGCA GCGTCTTGAA AGTTGTGAAA TCATCGTCGC GTTCATCATC GAATGGTCGC CATACACCTT CCAGACCGCC GAAGAGAACG CACAGCGCCA CAAGCGCCGC GAGGAAGAGA TCTCAACCGC CCGCGCGCGG GTGGTGGACC CGGCGGTCAA GGCCCTGAGC GCGGCGGGAT TTGCCGCCAC GGGCGTGGTG CGCCACGGGG ATGTGGCCGA TCTTCTGGAC AAGATCGCCA AGAAGGACGG CGCGGAACAG ATTGTCGTGG CCCGAAGTTC CGAGGGCGGT TTCGTCAACC GCGTCTTCGG CACCTCGACC GTCAATCTCG TGCTGCATGC CAGCGTCCCC GTCACCGTCG TCCCGTGA
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Protein sequence | MTSKIVVGLD GSQSGERALT YAQGLAQRLE SCEIIVAFII EWSPYTFQTA EENAQRHKRR EEEISTARAR VVDPAVKALS AAGFAATGVV RHGDVADLLD KIAKKDGAEQ IVVARSSEGG FVNRVFGTST VNLVLHASVP VTVVP
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