| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1788 |
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| Symbol | |
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| ID | 5713357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1859873 |
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| End bp | 1860394 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267708 |
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| Product | putative cold shock protein |
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| Protein accession | YP_001533131 |
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| Protein GI | 159044337 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000033725 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAAAGC CGATAACCAG TAGTCCCCTT GTCTATGGGA CAGTCAAATG GTTCGATCCC
AAGAAGGGGT TCGGCTTTGT CGTGGGCGAG GCCGATGGCC CCGATATCCT GCTGCATGCC
AACGTATTGC GGAATTTCGG GCAGAGTTCG GTGGCCGATG GATCGCAGAT CCAGATCCGC
GTGCAGGAAA CGCCGCGCGG CATCCAGGCG GTCGAAGTGG TCGCCATCAC GCCCCCGGAA
ATGGATCTCG ACGACGAAGG CCCGCTTGGT GCGCCGCAGA ATTTCGACGA CGTCCCCATG
GTCCCCGGGC GCGTGAAATG GTTCGACAAG GTGAAGGGCT TCGGCTTTCT CAACGTGTTC
GGCGCGGATG AGGATATCTT CGTACACATG GACGTGCTGC GGCGCTGCGG CTTTTCCGAT
TTGCAGGCCG GAGAGGCCGT GGCGGTCCGC ATCGGCGAGA GCGAGCGGGG GCGCCTCGCC
CTCGAGGTTC TGAGTTGGGA CGCCGCGCAG AAAGTCGAAT GA
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| Protein sequence | MQKPITSSPL VYGTVKWFDP KKGFGFVVGE ADGPDILLHA NVLRNFGQSS VADGSQIQIR
VQETPRGIQA VEVVAITPPE MDLDDEGPLG APQNFDDVPM VPGRVKWFDK VKGFGFLNVF
GADEDIFVHM DVLRRCGFSD LQAGEAVAVR IGESERGRLA LEVLSWDAAQ KVE
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