| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1746 |
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| Symbol | |
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| ID | 5713313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1811339 |
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| End bp | 1812232 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267664 |
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| Product | HTH-type transcriptional regulator |
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| Protein accession | YP_001533089 |
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| Protein GI | 159044295 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.747991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA ACTGGGACGA CCTGCGCGTT TTCCTGCATG TGGCCCGGGG GGAGGGGCTG
ACGGCGGCCG CGCGGACCTT GCGGCTTGAC CCGGCCACGG TGGGCCGCCG CATCGCCCGG
CTGGAGGAGG TTGTGGGCGA GGCGCTGTTC CTCAAATCCC CGCAAGGCTA CCAGCTGAGC
GATGCAGGGG CGCGCTACCT GCCCCATGCG GAGGCCGCCG AGCAAGCCGC CCGCGCCGCG
GGCGATGCGC TGGCCGGGAC CACCGAGGAC CTCAGCGGAC CGGTCCGGAT CGGCGCGCCC
GATGGCTGCG CCAACTACCT GCTGCCCAGC GTCTGCGCCC GCATGCTCGA CGCCCATCCG
GCGCTGGAGT TGCAGATCAT CGCCCTGCCG CGGGTCATCA ACCTCAGCAA ACGCGAGGCG
GATCTGGCGA TCACCGTCTC CCCGCCCGAA ACCGGGCGCC TGACGGTGCA GAAGCTTGCC
GATTACCACC TGCATCTGGC CGGGCACCGC GACCTGCTGG CGCGCCTGCC GGTGGCCACG
CGGGCCGATA TCGCCGCCCA CCGGATCGTC GGTTACATCC CGGACATGGT CTTCGACCGA
GAGCTCGACT ATCTGACCGA GCTCGGCCTC GACCGGGCGG CGGTGGCGTC CAATTCCGTG
GCGGTGCAGC TCAACCTGTT GCGGGCGGGG CTCGGCCTCG GCGTGGTGCA TGATTTCGCC
CTTCCCGCGG CGCCGGACCT GACCCGGGTG CTGCGGACCG ATTTCGCCCT GCGCCGCAGC
TTTTACATCG TGCGCCACGC GGATGACCAA AAAGTCGTAC GTCTGCGCCG CTTCACCCGG
ATTTTCAACG AGTTTTTTCG CGACGAACTG GCCCGGCTGG AGCGTGACGC TTGA
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| Protein sequence | MDLNWDDLRV FLHVARGEGL TAAARTLRLD PATVGRRIAR LEEVVGEALF LKSPQGYQLS
DAGARYLPHA EAAEQAARAA GDALAGTTED LSGPVRIGAP DGCANYLLPS VCARMLDAHP
ALELQIIALP RVINLSKREA DLAITVSPPE TGRLTVQKLA DYHLHLAGHR DLLARLPVAT
RADIAAHRIV GYIPDMVFDR ELDYLTELGL DRAAVASNSV AVQLNLLRAG LGLGVVHDFA
LPAAPDLTRV LRTDFALRRS FYIVRHADDQ KVVRLRRFTR IFNEFFRDEL ARLERDA
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