Gene Dshi_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1743 
Symbol 
ID5713310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1809314 
End bp1809916 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content69% 
IMG OID641267661 
Producthypothetical protein 
Protein accessionYP_001533086 
Protein GI159044292 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.543402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.687205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAG TCGACGGGTT CAGCCCGGTG CCCCCGGGCA AGGTGGCCAC TATCGTCACG 
CATCTGGAAA TGACCGCGCG CCCCGATCCC GCGCCGGTGC CGGAGCTGCC ATCGCTGGTT
CTGGGAAGGG TCCGCGCGCC TGATCTGGCG CAGTACCGGC AGGTTTTCCT CGATGTCGGC
GGGCGCGAAT GGCTCTGGTG CTCGCGGCTC CTGCTCGATG ACGCAGCACT GGCCGCGATC
CTGAACGACG ACGCGGTGGA GCTTTTCTAT CTGCGCGACG GTGCGGCGGT GGTCGGTCTG
CTGGAGCTCG ATTTCCGCGA GACCGGCGCT TGTGAGTTGG CCTTCCTGGG CCTCGTGCCC
GCGTGGGTCG GGCGTGGGGC AGGGCGCTAC CTGATGAACA TCGCGCTGAC CCGCGCCTGG
ACGCGTCCCA TCACCCGGAT GCATGTGCAT ACCTGCACCC TCGATCACCC AGGGGCGGTG
GCCTTCTATC GCCGCGCAGG CTTCGTGCCG GTGCGGCAGG AGGTGGAGGT GTTCGACGAT
CCGCGCCTGG GCGGGATCCT CCCGCCCGAC GCCGCGCCGC ACATCCCCGT CTTCACCCCC
TAG
 
Protein sequence
MQQVDGFSPV PPGKVATIVT HLEMTARPDP APVPELPSLV LGRVRAPDLA QYRQVFLDVG 
GREWLWCSRL LLDDAALAAI LNDDAVELFY LRDGAAVVGL LELDFRETGA CELAFLGLVP
AWVGRGAGRY LMNIALTRAW TRPITRMHVH TCTLDHPGAV AFYRRAGFVP VRQEVEVFDD
PRLGGILPPD AAPHIPVFTP