Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1743 |
Symbol | |
ID | 5713310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1809314 |
End bp | 1809916 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641267661 |
Product | hypothetical protein |
Protein accession | YP_001533086 |
Protein GI | 159044292 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.543402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.687205 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAG TCGACGGGTT CAGCCCGGTG CCCCCGGGCA AGGTGGCCAC TATCGTCACG CATCTGGAAA TGACCGCGCG CCCCGATCCC GCGCCGGTGC CGGAGCTGCC ATCGCTGGTT CTGGGAAGGG TCCGCGCGCC TGATCTGGCG CAGTACCGGC AGGTTTTCCT CGATGTCGGC GGGCGCGAAT GGCTCTGGTG CTCGCGGCTC CTGCTCGATG ACGCAGCACT GGCCGCGATC CTGAACGACG ACGCGGTGGA GCTTTTCTAT CTGCGCGACG GTGCGGCGGT GGTCGGTCTG CTGGAGCTCG ATTTCCGCGA GACCGGCGCT TGTGAGTTGG CCTTCCTGGG CCTCGTGCCC GCGTGGGTCG GGCGTGGGGC AGGGCGCTAC CTGATGAACA TCGCGCTGAC CCGCGCCTGG ACGCGTCCCA TCACCCGGAT GCATGTGCAT ACCTGCACCC TCGATCACCC AGGGGCGGTG GCCTTCTATC GCCGCGCAGG CTTCGTGCCG GTGCGGCAGG AGGTGGAGGT GTTCGACGAT CCGCGCCTGG GCGGGATCCT CCCGCCCGAC GCCGCGCCGC ACATCCCCGT CTTCACCCCC TAG
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Protein sequence | MQQVDGFSPV PPGKVATIVT HLEMTARPDP APVPELPSLV LGRVRAPDLA QYRQVFLDVG GREWLWCSRL LLDDAALAAI LNDDAVELFY LRDGAAVVGL LELDFRETGA CELAFLGLVP AWVGRGAGRY LMNIALTRAW TRPITRMHVH TCTLDHPGAV AFYRRAGFVP VRQEVEVFDD PRLGGILPPD AAPHIPVFTP
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