| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1735 |
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| Symbol | speB |
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| ID | 5713302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1801557 |
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| End bp | 1802531 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267653 |
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| Product | agmatinase |
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| Protein accession | YP_001533078 |
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| Protein GI | 159044284 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
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| TIGRFAM ID | [TIGR01230] agmatinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.252454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.73109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCG AAGATGCGGG CGGCGAGGTC GATGGCGCCT TCACCCGTCC CGACCCGCGC
GGTCTGAGCT ATGAGGCGGC CTATGGCGGC GCGCTGAGCT TCCTGCGCCG CCGCTACACC
AAGGAGCTGA GCGGCGTGGA TGTCGCGGTC TCCGGCGTGC CCTTCGATCT GTCGGTGACC
AATCGGCCCG GCTGTCGGCT GGGCCCCCGC GCGATCCGCG AGGCGTCGTC GCTGCAACCC
TTCGATCCGC CCTATGGCTG GGGGTTCGAC CCGCTGTCGG AGTTCACCGT GGTGGATTAC
GGCGATCTGG CCTTCGATTA CGGTCGCGCG GCGGGGTTCC CAGCGGCGCT CGAGGCCCAT
ATCCGCACCA TTCTGGCGGC TGGCGCCGCG CCGCTGACCA TGGGCGGGGA CCATTATATC
AGCTATCCGA TCCTGCGCGC GCTGGCCGAG GTCCACGGGC CCTTGTCGCT TCTGCAGTTC
GATGCCCATT CCGACACCTG GCCTGACGAG GATCGCGACC GGCTGGATCA CGGGACCATG
TTCTACAAGG CGGTGAAGGA CGGGCTGATC GATCCTGCGC GCTCGGTGCA GGTGGGGATC
CGCACCACCA ACGATACCGA TCTCGGCTTC CACGTAATCG ACGCCCGCGA GGTGCACGAA
GCGGGCGCCG CGGCCGTGGC GGCCAAGGTC CGGGGCATCC TGGGCGATCA CAAGACCTAC
CTGACCTTCG ACATCGACTG CCTCGATCCG GGCACCGCCC CGGGTACGGG CACGCCGGTC
TGGGGGGGCT TGAGCGCGGG GCAGGCGGCG ATCCTGCTGC GCGACCTGGC GGGCATCACC
GTGGTGGGCG GCGACGTGGT CGAGGTCTCT CCGCCCTATG ATCCGTCCGG GGCGACGGCG
GTGGCAGGCG CCCATGTGAT GACGGAAATC CTGTGCCTCT GGGCCTGGAC ACGCCGCAAG
GGCGGGCAAG CCTGA
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| Protein sequence | MALEDAGGEV DGAFTRPDPR GLSYEAAYGG ALSFLRRRYT KELSGVDVAV SGVPFDLSVT
NRPGCRLGPR AIREASSLQP FDPPYGWGFD PLSEFTVVDY GDLAFDYGRA AGFPAALEAH
IRTILAAGAA PLTMGGDHYI SYPILRALAE VHGPLSLLQF DAHSDTWPDE DRDRLDHGTM
FYKAVKDGLI DPARSVQVGI RTTNDTDLGF HVIDAREVHE AGAAAVAAKV RGILGDHKTY
LTFDIDCLDP GTAPGTGTPV WGGLSAGQAA ILLRDLAGIT VVGGDVVEVS PPYDPSGATA
VAGAHVMTEI LCLWAWTRRK GGQA
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