Gene Dshi_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1734 
Symbol 
ID5713301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1801041 
End bp1801505 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID641267652 
Producthypothetical protein 
Protein accessionYP_001533077 
Protein GI159044283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.368748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACT GGATCGGTAT TCTCATCATC GTAGCGATGT TCGCCTTCGT TGCGCTCATG 
GCGGTCTTTC GCCTCGCCCC CAGTGACCCG GCGGAGTGGC ACGTGGACCC GACCGACCCG
AGCCTGAGCG CCGGGAGCGG CGCGGCGCTG GTGCGCTCGG ACGGCAACCT GCAAAGCCCG
GTCTTCGACG AAACTCCCGA GGCGCTGCTG GCGCGGCTCC ATGCCATTGC GGACGCGACC
CCGCGCACCC GCGTGCTCGC CGGCAGCCCG GAGGAGGGGC GTGTGACCTA CATGACCCGC
TCCCTGGTCT TCGGCTTTCC CGACTATACC AGCGTCACCA CGATCCCAAT GGGCGACGGT
GCGCAAGTGG TGGCTTACGG GCGTCTGCGC TTTGGCAGCT CCGACATGGG CGTGAACACC
GAGCGCTTGT CCGGTTGGCT CGACCAGCTT CAGACCACCC GCTGA
 
Protein sequence
MGNWIGILII VAMFAFVALM AVFRLAPSDP AEWHVDPTDP SLSAGSGAAL VRSDGNLQSP 
VFDETPEALL ARLHAIADAT PRTRVLAGSP EEGRVTYMTR SLVFGFPDYT SVTTIPMGDG
AQVVAYGRLR FGSSDMGVNT ERLSGWLDQL QTTR