| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1645 |
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| Symbol | rsmB2 |
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| ID | 5713210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1708348 |
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| End bp | 1709526 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641267561 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase |
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| Protein accession | YP_001532988 |
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| Protein GI | 159044194 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000000605846 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACCTG CCGCGCGGGT GCAAGGCGCC ATCGAGATTC TGGAGGCATA TCTCTCGGGG
CAGTCTGCGG AGCAGGCCCT GAGCCGTTGG TGCCGGTCGC ATCGTTTTGC AGGCTCCAAA
GACCGTGCCG CTTTGCGCGA TCTCGTGTTC GATGCCTTGC GCTGTCGGGC GAGTTACGCT
TGGCTTGGCG GTGGTCTGAG CGCGCGAGGC TTGATGGTCG GCGCGCTTCG AAAGCGCGGG
CTGGCGCCCG AGGACCTGTT CAACGGACAA ACCTACGCAC CCTTTCCGGT GACCGGGGAC
GAGATCGCTC AATTCGGCCA AGCCGAGAAC ATGCCGGATG ATGTGGCCCT GGATATGCCG
GGCTGGCTTT TTGCCCAGCT GCAAGACAGC TTTGGCGAAG CAGCATTGGG CGTGTGCGCG
GCCTTGCAGC AGCGTGCCCC GGTGGATTTG CGGGTCAATA CCTTGAAGGC ATCTGTGGGG
CAGGCAGAAG AAGCCCTTTA TGAAGACGGA ATCGCGACTG AACGGGTTGC GGGCGTGGCG
ACCGCTCTTC GGGTCGTGGA GGGCGCTCGC AGTGTTGTCA GGTCGCGCGC CTTTACAGAC
GGCCTTGTGG AGTTGCAGGA CGCCGCCTCG CAACTGGCCG TTTTGCGCAG CCCTGTACCT
CACAAGGGAC GCATTCTCGA CTTTTGTGCC GGTGGTGGCG GGAAAGCGTT GGCCCTCGCG
GCAGGAAGTG GGGGGTGCAT CCATGTGCAC GACGCAAACC TCAAAAGGAT GCGGGACCTG
CCAGATCGGG CAGCTCGTGC AGGGGCAGAC CTGCGAATGT GGAATCGCGC GGAGGCGCGC
GCGTTCGACC TTGTATTCTG TGATGCGCCA TGTTCGGGCA GCGGCACCTG GCGGCGCTCA
CCCGAGGCCA AGTGGACGCT GACGCCAGAC CGGCTTGCAG AGTACGTTGC AACCCAGAGA
ACCGTACTGA CCGCCGCCGC ACCCCTGGTG CGGCCGGGCG GTTTCCTCGT TTACGCGACC
TGCTCAATAC TGACGGTGGA AAATGCCGCG CAGACTGCTT GGTTCTTGCA GGCGTTTCCC
GCATTTTCGC TTCTGGAGGC ATCGCAGATG TTGCCCGAAA ACCCGGGGGA CGGATTCTAC
TTCGGTATCC TTCGGAATGA ACGCTCAACC AAAGGTTGA
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| Protein sequence | MTPAARVQGA IEILEAYLSG QSAEQALSRW CRSHRFAGSK DRAALRDLVF DALRCRASYA
WLGGGLSARG LMVGALRKRG LAPEDLFNGQ TYAPFPVTGD EIAQFGQAEN MPDDVALDMP
GWLFAQLQDS FGEAALGVCA ALQQRAPVDL RVNTLKASVG QAEEALYEDG IATERVAGVA
TALRVVEGAR SVVRSRAFTD GLVELQDAAS QLAVLRSPVP HKGRILDFCA GGGGKALALA
AGSGGCIHVH DANLKRMRDL PDRAARAGAD LRMWNRAEAR AFDLVFCDAP CSGSGTWRRS
PEAKWTLTPD RLAEYVATQR TVLTAAAPLV RPGGFLVYAT CSILTVENAA QTAWFLQAFP
AFSLLEASQM LPENPGDGFY FGILRNERST KG
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