Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1615 |
Symbol | |
ID | 5712759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1680082 |
End bp | 1680672 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641267530 |
Product | hypothetical protein |
Protein accession | YP_001532958 |
Protein GI | 159044164 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.338894 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTT CCTCTTTGTC TCGCATCACG ATCTTTGCAG TTACCGCGCT GCTTGCGGGA CCGGCCTTGG CACAAGACGC CAGCAGCCCC GCCGAAGACG CCGCAGCCAA CGAGGAGGTG GCGACCGGAC AGACCTATAT CCGCGAAACC ATCACGGATT GGAGCTTGCG CTGCATTCGC GGCGAGGGCG CGCTGGAGGA TGACAACTGC CAACTCTATC AGCTTCTTCT GGACACGTCG CAGAACCCGG TGGCGGAATT CACCCTGTTG CCTGCGCCCG AAGGCAGCCA GGCAGCCGCA GCCATCACCA TCGTCACACC TCTGGAGACG ATCCTGACAG AAGGGCTGAT CCTGTCGATT GACGAGACCA CCTTGCCTCC ACAGCCGTTC CTCTGGTGCA ATCGGACCGG GTGTTATTCG CGGTTCGGTG TCTCGGATGT CGAGATCGAC GCCATGAAGC GCGGCTCCGT GGCCACGGTG TCGATCGTGG CGCTGGCTGC ACCGCAGCAA AGGGTCGAAG TCACGGCGTC GCTGCGGGGG TTCACGGCGG CTTTCGACAA GTTGAAAGCG GAGCTCACGC CCCCCGAGTA A
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Protein sequence | MIRSSLSRIT IFAVTALLAG PALAQDASSP AEDAAANEEV ATGQTYIRET ITDWSLRCIR GEGALEDDNC QLYQLLLDTS QNPVAEFTLL PAPEGSQAAA AITIVTPLET ILTEGLILSI DETTLPPQPF LWCNRTGCYS RFGVSDVEID AMKRGSVATV SIVALAAPQQ RVEVTASLRG FTAAFDKLKA ELTPPE
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