Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1603 |
Symbol | |
ID | 5712747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1667361 |
End bp | 1667783 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641267518 |
Product | putative thioesterase superfamily protein |
Protein accession | YP_001532946 |
Protein GI | 159044152 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.322772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.911093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCA AGATGGATGG ACCCGCGCTG GAAGGGTTTC TGCAAGAGGC CTTTCCGCAA GTCGCCGAGG ATTTCCGCAT CGAAGAGGTC GCAGCAGAGC AAATGCGCGT GCGCCTCGTG ATAACCGAGA AACATCTGCG CCCCGGCGGG ACCGTGTCGG GTCCCTCGAT GTTCGCACTG GCGGACGTCG CGCTTTACCT GATGGTGCTG GCGCGGCTTG GGCCCGTCGC TTTGGCGGTG ACCACCAACT GCAACATCGA CTTCATGCGA AAGCCGGCGG CGGGAAAGGA CCTGATTGGC GAGGCGCGCC TGCTCAAGCT CGGGCGCAGC CTTGCGGTGG GCGATGTGCT GATCCGCTCG GAAGGCTCCA AGGCTGTCGT GGCGCGGGCT TCGCTGACCT ATTCGATTCC GCCTTCGAAC TGA
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Protein sequence | MSVKMDGPAL EGFLQEAFPQ VAEDFRIEEV AAEQMRVRLV ITEKHLRPGG TVSGPSMFAL ADVALYLMVL ARLGPVALAV TTNCNIDFMR KPAAGKDLIG EARLLKLGRS LAVGDVLIRS EGSKAVVARA SLTYSIPPSN
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