| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1590 |
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| Symbol | |
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| ID | 5712734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1656339 |
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| End bp | 1657472 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641267505 |
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| Product | porin |
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| Protein accession | YP_001532933 |
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| Protein GI | 159044139 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0885726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA TTCACCTGGC GTTGGCCAGT GGTACGGCAG TCGCACTGGC GACACAGGCC
TTCGGCGGTG GAGTTGAACG GTCCACACAA AGCGTTGGGA TTCTCTTTGA AGAGGGCACC
TACGCTGAGC TGTCTTTCGG GCAGGTTGAT CCGGATGCAA GCGGGGATTT CGTGCTCGAC
CGGTCCGTGT CGACCGGTGA CATGCTCGCC TCGGAGAACA TCTTTACCCT GTCGTTCAAG
ACCGATCTGA GCGACCGGCT GGTTGCCGCG CTGGTCCTCG ACCAGCCCGT GGGGGCGCGG
ATCCGCTACC CCGAGGGCAC CGGCCATCCC TTTGCAGGCT CCAAGGCGGA TCTCGATGCG
CGGGCGCTCA CCGCGATGCT GCGCTACAAG TTCGACGGTG GGTTCAGCGT CTATGGCGGC
CTGCGCGCCC AACAGGTGGA GGGCTTCGTC GCTCTGCCCA CGATCCCGGG CTACGAGTTG
ACGACCAACA ACGACCGCGA GTTCGGCTAT ATGGTCGGTG CGGCCTATGA ACGTCCCGAG
ATTGGTCTGC GGGTGGCGCT GACCTATAAC TCGGCCATCG ACCATAATTT TGAATCTTCC
GAGAGCTTCC TGACCCCGGG CGGGCCTGCC GTTCTGGACG ACGGGTTCAA GACGACAATC
CCGCAGTCGG TGCATCTCGA GGCGCAAACC GGAATCGCGG CAAACACGCT GCTCTTCGGC
TCGATCCGCT GGGTCGATTG GAGCGAGTTC GAGATCGATC CGCCGGTCTA CGCCGCTGGG
ATCGCATCGC TCGGCCAAGA CTATGCCCTT GCCGCCTACG AAAGCGACAC GATCACTTAT
AGGATCGGCG TTGGGCGACG TTTCAACGAG AATTGGGCCG GAGCGATCAC CTATATCCAC
GAACCCGACA GCGGCGATAT TTTCGGAAAC TTAGGACCGA TCGACGGTCG CGACGCCATA
TCGCTCGGGG TGACCTACAG CCGGGACAAC ATCAAGATCA CCGGCGGTGT CGAATACGGC
TGGCTTGGTG ATGCCCTGTC CCAGGCGCCC AACGGACCGC CGGGAACGCC GGTCTCGGAC
TTCCGGGACA ACACCTCTGT CAGCTACGGC TTCCGGATCG GCTACTACTT CTGA
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| Protein sequence | MRKIHLALAS GTAVALATQA FGGGVERSTQ SVGILFEEGT YAELSFGQVD PDASGDFVLD
RSVSTGDMLA SENIFTLSFK TDLSDRLVAA LVLDQPVGAR IRYPEGTGHP FAGSKADLDA
RALTAMLRYK FDGGFSVYGG LRAQQVEGFV ALPTIPGYEL TTNNDREFGY MVGAAYERPE
IGLRVALTYN SAIDHNFESS ESFLTPGGPA VLDDGFKTTI PQSVHLEAQT GIAANTLLFG
SIRWVDWSEF EIDPPVYAAG IASLGQDYAL AAYESDTITY RIGVGRRFNE NWAGAITYIH
EPDSGDIFGN LGPIDGRDAI SLGVTYSRDN IKITGGVEYG WLGDALSQAP NGPPGTPVSD
FRDNTSVSYG FRIGYYF
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