| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1559 |
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| Symbol | |
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| ID | 5712703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1620493 |
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| End bp | 1621701 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267474 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_001532902 |
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| Protein GI | 159044108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.418069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.23279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCG CCCGCCTGTC CCAAGCCGAG TTCATTGCCC TGATGGCGAT GCTGTTCGCG
ACGATTGCGT TTTCCATCGA CGCGATGCTT CCCGCCCTGC CCGAGATCGC CGCCGAACTG
ACGCCCGGTG ACGTGAACCG GGCGCAGTTG ATCGTGACCT CGTTCGTATT CGGGATGGGT
TTGGGCACCC TGGTGGCCGG GCCCTTGTCG GATGCCTTCG GGCGCAAGCC GGTGATCGTG
GCGGGCGCGG TGCTCTATTG CGCGGCGGCG GGGCTGGCTT GGGCGGCGCA ATCGCTGGAA
CTGGCATTGG CGGCACGGGT GCTGCAGGGG TTCGGCGCGG CCGCCCCGCG GGTGGTGGCG
ATCGCCATGG TGCGCGACCT CTATGTCGGG CGGCACATGG CGCGGATCAT GTCGCTTGTC
TTCCTGATCT TCGCGCTGAT CCCGGCCATC GCGCCGAGCC TTGGCGCGGT CATCATCCAT
TTCGCCGGGT GGCGGGCGAT TTTCGCCTCC TTCATCCTGT TTGCCATGCT GTCGGTGGGC
TGGATGATGC TGCGCCAGGC CGAAACCCTG GCGCCCGAGG CGCGCAGGCC GCTCTCGGTG
CGGGGTGTGG CGGACAATGT GGTCGAAGTG CTGCGCGACC GGGTGGTGCG CCTGTCGATC
CTGGCGCAAA CCATGGCCTA TGCCACGTTA TTTGCGACGC TGTCCTCGAC CCAGCCGGTG
TTCGATGTGA CCTTCGGCAA GGCGGAGACC TTCCATCTGT GGTTCGCGGT GATCGCCCTT
CTGGCGTCGA GCGCCAGCTA CATCAATTCG CGGCTGGTGG TGCGGCTGGG CATGCGGCGC
ATGGTGCGCG GGGTGCTGAC CGGGCAGATC GCGGTCTCGG GCGTGTTCCT GTCCGTGAGT
GTCGTGGGCT GGCCCGAGGC ACTGCATTTC TGGGCCTATT TCGTCTGGGT GACGGGGGTG
TTCTTCATGG CGGGCATGAC CCTGGGCAAC CTCAATGCCA TCGCGATGGA GCCGATGGGG
CATATCGCGG GCACGGCGGC CTCGGTGGTG GGGGCGCTGT CGACCATGGG GTCGGTGTTA
CTGGCCATTC CCATCGGGCT GCTGTTCGAC GGCACGCCGG TGCCGGGCGT TGCGGGGGTT
CTGGTGCTGT GCCTCGGGGC GCTGGCCGTG ATGAAGGTGC TGGGCGCGCG GGGTGAGGCG
CCGGCCTGA
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| Protein sequence | MPPARLSQAE FIALMAMLFA TIAFSIDAML PALPEIAAEL TPGDVNRAQL IVTSFVFGMG
LGTLVAGPLS DAFGRKPVIV AGAVLYCAAA GLAWAAQSLE LALAARVLQG FGAAAPRVVA
IAMVRDLYVG RHMARIMSLV FLIFALIPAI APSLGAVIIH FAGWRAIFAS FILFAMLSVG
WMMLRQAETL APEARRPLSV RGVADNVVEV LRDRVVRLSI LAQTMAYATL FATLSSTQPV
FDVTFGKAET FHLWFAVIAL LASSASYINS RLVVRLGMRR MVRGVLTGQI AVSGVFLSVS
VVGWPEALHF WAYFVWVTGV FFMAGMTLGN LNAIAMEPMG HIAGTAASVV GALSTMGSVL
LAIPIGLLFD GTPVPGVAGV LVLCLGALAV MKVLGARGEA PA
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