| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1556 |
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| Symbol | |
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| ID | 5712700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1617876 |
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| End bp | 1619435 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641267471 |
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| Product | putative ATP-dependent AMP-binding enzyme |
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| Protein accession | YP_001532899 |
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| Protein GI | 159044105 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.493299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.349479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCAGGCG ACTTGCAACC GCGCCGCGCG GGGCCTAGCA CGGGGGTCAT GCCGTTGCCC
GACGATTTCG ACCCCGCCGC ACCCTGCCCC GCGCCATTCA ACCTGGCGGG GTATGTCTTG
GCCGCCGGGG ATGAGGACAA GATCGCGCTG GAGGTGCTGG GCGGTGGCGC GGTGCGCTGG
ACCTTCGGAG ATCTGCGCCG GGCGGTGGCG GGCTATGCCG CAGCACTGCG GACCGAAGGG
TTGGCGCCTG GTGACAAGCT ATTGATGCGG TTGGGAAATA CGGTGGAGTT TCCGCTGCTG
TTTCTGGCTG CGGTGGCGGC AGGCGTGGTG CCGGTGCCGA CCTCGGCGGC GCTGACGGTC
GAGGAGGTCG ACTGGATCGC GGCGGACCTC GCCCCGGCGC TGACGGTGCA GGCGCCGGGC
GTTGCGGGGC CGTCGCGGGG CCGCGTGGTG GCATTGGAGG CGCTGGTGCC GGACCGGGAC
GCGCCGCTGG CGCCGGTGCC GGGGGATCCG GACCGCATGG CTTACGTGGT CTATACCTCG
GGCAGTTCGG GGCGGCCGCG GGCGGTGGCC CATGCGCATC GCGCGATCTG GGCCCGGCGG
ATGATGTGGC GCGACTGGTA CGGGATGGGG CCGGAGGACC GGATCCTCCA TGCCGGGGCG
TTCAACTGGA CCTATACGCT GGGCGTCGGG CTGCTGGATC CGTGGGCGAT GGGGGCGACG
GCGCTGATCC CCGAGGCCGG GACAGACAGT GCCGCCCTGC CCGAGGCGCT GGCCGCGAGT
GGGGCCAGTA TTTTTGCCGC GGTTCCAGGG GTATACCGAC AGATTTTGAA GCAAGAAGCC
CTGCCCCGGC TCCCCCGTCT GCGCCACGGG TTGACGGCGG GCGAAGCGCT GCCCGACAGC
CTGCGCGCGG CGTGGCGGGA CCGTGTCGGC ACCGAGCTTT ACGAGGCGTT GGGGATGTCG
GAATGCTCCA CCTTCATCTC GGCCCATCCG GGCCGACAGG CCCCCCCGGG CCATGCGGGG
TTTGCCCAGG CCGGGCGGCG GATCGCGGCG CTGGACGCCG ACGGGGTCGA GGTGGCGCGG
GGCACATCCG GAGTTCTGGG CGTGCATCGC GGCGATCCGG GGCTGATGCT GGGCTACCTG
GAGGGCGGTC GGCCCCGCCT GCCCCTGACC GGCGATTGGT TCGTGACCGG CGACATGGTG
GAGATCGCCT CGGATGGCGC GGTGCGCTAC CTCGGCCGGG GCGACGACAT GATGAACGCG
GGCGGATTCC GGGTCTCGCC ACTGGAGGTC GAAAAGGCGT TCCACGGGCG GCCGGAGATT
GGCGAGGCGG CGGCGGTGGA GGTGAAGATC AAGGCGGATG TCACTGTGAT CGCGTTATTT
TACGTCGCCG CCGCCCCGGT GACGGAGGCC GCACTTGCCG CGGAGGCCGC GCAACATCTG
GCCCGGTACA AGCAGCCACG GCTTTACATT CCGGTCGAAA CCCTGCCCAA GGGGCGGACC
GGAAAACTGG ATCGCCGGGC GCTGCGCGCG GCGTATGAGG CACGCCATGA TCAAGCTTGA
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| Protein sequence | MSGDLQPRRA GPSTGVMPLP DDFDPAAPCP APFNLAGYVL AAGDEDKIAL EVLGGGAVRW
TFGDLRRAVA GYAAALRTEG LAPGDKLLMR LGNTVEFPLL FLAAVAAGVV PVPTSAALTV
EEVDWIAADL APALTVQAPG VAGPSRGRVV ALEALVPDRD APLAPVPGDP DRMAYVVYTS
GSSGRPRAVA HAHRAIWARR MMWRDWYGMG PEDRILHAGA FNWTYTLGVG LLDPWAMGAT
ALIPEAGTDS AALPEALAAS GASIFAAVPG VYRQILKQEA LPRLPRLRHG LTAGEALPDS
LRAAWRDRVG TELYEALGMS ECSTFISAHP GRQAPPGHAG FAQAGRRIAA LDADGVEVAR
GTSGVLGVHR GDPGLMLGYL EGGRPRLPLT GDWFVTGDMV EIASDGAVRY LGRGDDMMNA
GGFRVSPLEV EKAFHGRPEI GEAAAVEVKI KADVTVIALF YVAAAPVTEA ALAAEAAQHL
ARYKQPRLYI PVETLPKGRT GKLDRRALRA AYEARHDQA
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