| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1554 |
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| Symbol | |
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| ID | 5712698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1616397 |
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| End bp | 1617161 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641267469 |
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| Product | putative isomerase |
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| Protein accession | YP_001532897 |
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| Protein GI | 159044103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.534878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.610325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTT CGGCAAATCT AGGTTTTCTT TGGAATGACA GAAGCTTGCC GGACGCCATT
CATGCGGCTG CCGCCGCCGG ATTCGACGCG GTGGAGTGCC ATTGGCCCTA TGACACGCCC
GCGGCCGAGG TCCGCGCAGC GCTGGAGGAC ACGGGGCTGC CGATGCTGGG TCTGAATACA
CGGCGCGGCG ATGTGTCGGC GGGCGAAAAC GGGCTTGCGG CGTTGCCCCG GCGCGAAATG
GAGGCGCGCG CGGCGATCGA CGAGGCGCTG GATTATGGCG CGGCGATCGG GGCGCGCGCG
GTGCATGTGA TGGCTGGGTT CGCGTCGGGA TCGGCGGCGC GGAAGTGCTT CGCAGGGAAC
TTGAAGTATG CCTGTGAGAT AGCTGAGAAT AAAGGGATTA CAGTTCTGAT CGAGCCACTG
AACCACTACG ATGCGCCGGG CTACTTCCTG AGCACAACGC GCCAGGCCGA AGCAATCGTC
GCCGAGGTTG GCGCGCCGAA CCTGCGGCTG ATGTTCGACT GCTACCACGT GCAACTGATG
GAGGGTGATC TGACCAACCG GTTGCGGCAG CTGCAGCCGA TCATCGGCCA TATCCAGTTC
GCGGGTGTGC CGGCGCGCGG AGCTCCGGAT GAGGGCGAGG TGAACTACGC CCATCTGTTC
GAGGTGATTG CCGCGATGGG CTGGGACGTG CCGCTGGGCG CGGAGTACAA ACCGGGGGGC
GATACTGACG CGACCCTGGG CTGGATGCAG CAATACAAGG CCTGA
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| Protein sequence | MKFSANLGFL WNDRSLPDAI HAAAAAGFDA VECHWPYDTP AAEVRAALED TGLPMLGLNT
RRGDVSAGEN GLAALPRREM EARAAIDEAL DYGAAIGARA VHVMAGFASG SAARKCFAGN
LKYACEIAEN KGITVLIEPL NHYDAPGYFL STTRQAEAIV AEVGAPNLRL MFDCYHVQLM
EGDLTNRLRQ LQPIIGHIQF AGVPARGAPD EGEVNYAHLF EVIAAMGWDV PLGAEYKPGG
DTDATLGWMQ QYKA
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