| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1548 |
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| Symbol | rpsB |
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| ID | 5712692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1611039 |
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| End bp | 1611818 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267463 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001532891 |
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| Protein GI | 159044097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.403357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTC CCGATTTCAA CATTCGCCAG CTTCTCGAAG CAGGCGTGCA CTTTGGCCAC
CAGACACAGC GCTGGAACCC GCGGATGGCC CCGTATATCT ACGGCGACCG CAACGGCATC
CACATCATGG ACCTGACGCA GACCGTCCCG ATGTTGGACC AGGCGCTGCA GGCGGTGCGC
GACACCGTCG CCAAGGGCGG CCGTGTGCTC TTCGTCGGCA CCAAGCGGCA GGCGCAGAAG
CCCATTGCCG AGGCCGCCGA GCGCTGCGCG CAGTATTACA TGAACCACCG CTGGCTGGGC
GGCACGCTGA CCAACTGGAA AACCGTGTCC AACTCCATCG GGCGGCTCAA GTCCATCGAC
GAGGCCATGG AAGGCGGCTT CGAGGGGCTC ACCAAGAAAG AGCGTCTTGG CATGGAACGC
GACCAGGGCA AGCTGCAGGC GTCCCTGGGC GGGATCCGCG AAATGGGCGG CGTGCCGGAC
CTGATCTTCG TGATCGACGT CAAGAAAGAG GACCTGGCGA TCGCCGAGGC CAACAAGCTG
GGCATCCCGG TCGTGGCCGT GGTCGACACC AACTGCTCGC CGGACGGCGT GGATTACGTG
ATCCCGGGCA ATGACGACGC GGCCCGCGCC ATCGCGCTCT ATTGCGACCT GGTGGCCCGT
GCGGCGCTGG ACGGGATGTC GGCGCAGCTG GGTGCGGCCG GCGTGGACCT GGGCGCGCTG
GAAGAGGGCG GCGTCGAGGA GGCCCTGGCC GAAGAGGCCG CCGCCCCCGC CGAGAGCTGA
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| Protein sequence | MALPDFNIRQ LLEAGVHFGH QTQRWNPRMA PYIYGDRNGI HIMDLTQTVP MLDQALQAVR
DTVAKGGRVL FVGTKRQAQK PIAEAAERCA QYYMNHRWLG GTLTNWKTVS NSIGRLKSID
EAMEGGFEGL TKKERLGMER DQGKLQASLG GIREMGGVPD LIFVIDVKKE DLAIAEANKL
GIPVVAVVDT NCSPDGVDYV IPGNDDAARA IALYCDLVAR AALDGMSAQL GAAGVDLGAL
EEGGVEEALA EEAAAPAES
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