Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1528 |
Symbol | |
ID | 5713185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1589674 |
End bp | 1590558 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641267443 |
Product | hypothetical protein |
Protein accession | YP_001532871 |
Protein GI | 159044077 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.214783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.106302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGTT TCGCCACCCG GGAAGGCAGT TTCGAGGACT GGACCTGGAC CTGGGATATC CGCGCCGTGA ACGGTCGCGG GCTCGACGTG AAACTGCGCC TGCCGGACTG GCTGCCCGGG CTCGACCGCG CCGTCCGCGC CCGGATCGCG AAGGCCGCAA AGCGTGGCAA CATCTCCGTC GCCCTGCGCC TCAATCGCGC CTTCGGCAGC GGTCAGAGCG TGAATGCCGA AGCGCTCGAC GCTGCCCTGC GCGCCCTGTC GGACCTGACG CTGCGCGCCG ATCAGGCGGG GGTGCAGCTG TCGCCTCCCA ATGCACTGGA TTTGCTGAAC TTTCGGGGCA TATCCGAGAC CGCGCCCCTG TCCGACGAGG CGCTTTCATC GCTGCAAGCC GCGCTGCTGG TTGACCTCGA CGCCGCCTTG CCGGCCTTTG TCGAGAGCCG CGAGCGCGAA GGGGCCGCCA CCGCGGCGGG GCTGACCGAG GCGCTGGACC AGGTCGCGGG GCACCTTGCC ACCGCGCGCC GTCTTGCCAA GGCCCGGCGC GACACCCAGG CCAGCCGCCT TAAAACCGCC ACCGCGCAAA TCCTCGAAGC CGCGGGCGAA GGCGCGCCGG ACCCCCAGCG CATCGCCCAG GAACTGGCCC TTCTGTTCGT AAAGGCTGAC GTTGCGGAAG AGTTGGACCG CCTCGACACC CATGTCTCCA GCGCCTGCGA AATCCTTAAC GCGGACGCCT CCATGGGCCG CAAGCTGGAC TTTTTGATGC AGGAATTTAA CCGTGAGGCG AACACGCTCT GCTCGAAATC CGCCGATGCC GCGCTGACGC AGGTGGGGCT GGATCTCAAG GTGCTGATCG ACCAGATGCG CGAACAGGTC CAGAACCTCG AATAG
|
Protein sequence | MTGFATREGS FEDWTWTWDI RAVNGRGLDV KLRLPDWLPG LDRAVRARIA KAAKRGNISV ALRLNRAFGS GQSVNAEALD AALRALSDLT LRADQAGVQL SPPNALDLLN FRGISETAPL SDEALSSLQA ALLVDLDAAL PAFVESRERE GAATAAGLTE ALDQVAGHLA TARRLAKARR DTQASRLKTA TAQILEAAGE GAPDPQRIAQ ELALLFVKAD VAEELDRLDT HVSSACEILN ADASMGRKLD FLMQEFNREA NTLCSKSADA ALTQVGLDLK VLIDQMREQV QNLE
|
| |