| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1527 |
|---|
| Symbol | |
|---|
| ID | 5713184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009952 |
|---|
| Strand | - |
|---|
| Start bp | 1588773 |
|---|
| End bp | 1589510 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641267442 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001532870 |
|---|
| Protein GI | 159044076 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5388] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.173239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.19078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGACC ACGTATCGAA TGTAAGCGAC CACGTAACCC AAGCGGATAA TACCATCGTG
TCTCTGAACA AGAAGAAGGT CACTTTGCGC AGCAAGATCC TGCTGGATGT CATGGACTAC
TGGGAAAGCA TGCGTGACGG GGATGCCCTG CCCCGGCGCG CCGATATCGA CCCGCGTCGG
ATCGAGGGGG CATTGCCCTA TGCGTTCATC CTCGAAGAAA TCGCGCCGGG CCTGGCGCGG
TTCCGGGTCG CGGGGGGGCA CTTGAACGAC CTGATGGGCA TGGAGGTGCG CGGCATGCCC
CTCAGTGCGG TGTTCAACCA CACCCAGCGC AACAAGCTGC TGCCGATGAT CGAGAACGTA
TTCCGCAGCC CGTCGTCGCT GGAGCTGACC CTGCAATCGC GCAGCCCGGG GGCCGAGACG
ACCCATGCGG AGCTGCTGAT CCTGCCGTTG CTGGACGATG ATGGCAACGT GACCCGGGCG
CTCGGTTGTC TTGTCGCCCA GGGCGCGATC CTGTCGCCGC CCTACCGGTT CCAGGTCACA
CAATCGCGCT CCACGCCGCT GCCTGCCCCA ACCGAGACCG GGCAGCCTGC CCTGCGCCGC
CCCAAGGTGC GTGCTCAGGA CCGGGTGCTC GAAGGCTTCC ACGAGCCTGC GGCGCGCTAT
GGCACCCCGA CATCGGCCCC TGCTGCCGAA GTGGCACCGG CGCAGTCCCT GCCTGGCTAC
CTGAGGGTCA TCAAGTAA
|
|---|
| Protein sequence | MPDHVSNVSD HVTQADNTIV SLNKKKVTLR SKILLDVMDY WESMRDGDAL PRRADIDPRR
IEGALPYAFI LEEIAPGLAR FRVAGGHLND LMGMEVRGMP LSAVFNHTQR NKLLPMIENV
FRSPSSLELT LQSRSPGAET THAELLILPL LDDDGNVTRA LGCLVAQGAI LSPPYRFQVT
QSRSTPLPAP TETGQPALRR PKVRAQDRVL EGFHEPAARY GTPTSAPAAE VAPAQSLPGY
LRVIK
|
|---|
| |