| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1521 |
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| Symbol | |
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| ID | 5713178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1582072 |
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| End bp | 1582854 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641267436 |
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| Product | putative high-affinity branched-chain amino acid transport ATP-binding protein |
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| Protein accession | YP_001532864 |
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| Protein GI | 159044070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.240271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGG TCGAAAACCT GCACAAGCAT TTCGGCGGCT TTCGAGCCGT GGACGGCGCC
ACGCTGGAGA TTGCGGAGGG CTCGATCACC GGGCTCGTGG GACCCAACGG CGCCGGAAAG
ACCACGTTGT TCAATGTGAT CGCGGGCAAT CTTCAACCGA CATCCGGCAA GGTCACCATG
CTGGGCGAGG ACATCACCGG CCTGCCGCCC CATGATCTGT TTCACAAGGG GCTGCTGCGG
ACCTTTCAGA TCGCCCATGA GTTCGGCTCG ATGACCGTGC GGGAGAACCT GATGATGGTG
CCCGGCGCGC AATCGGGCGA GACCATGTGG AACGCGTGGT TCAAGCGCGG CCAGATCGCG
CGCGAGGAAG CGGCCTTGGG AAAGAAGGCC GACGAAGTGC TTGAATTCCT GACCATAGAT
CATCTGCGCG ACGAGCGGGC CGGGAACCTG TCCGGCGGGC AGAAGAAGCT GCTGGAGCTG
GGGCGCACGA TGATGGTGGA CGCCAAGATC GTGTTTCTCG ACGAGGTCGG CGCGGGGGTG
AACCGTACCC TTCTGGGCAC CATCGCCGAT GCGATCCTGC GGCTGAACCA GGAGCGTGGC
TATACCTTCT GCGTGATCGA GCATGACATG GATTTCATCG GCAAGCTGTG TGATCCGGTG
ATCGTCATGG CCGAGGGCAA GAAGCTGGCC GAGGGCACCA TCGACGAGAT CAAGGCCAAC
GAGCAGGTGA TCGAGGCCTA TCTCGGTACG GGCCTGAAGA ACAAGGAAAA GACGCCGGCA
TGA
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| Protein sequence | MIKVENLHKH FGGFRAVDGA TLEIAEGSIT GLVGPNGAGK TTLFNVIAGN LQPTSGKVTM
LGEDITGLPP HDLFHKGLLR TFQIAHEFGS MTVRENLMMV PGAQSGETMW NAWFKRGQIA
REEAALGKKA DEVLEFLTID HLRDERAGNL SGGQKKLLEL GRTMMVDAKI VFLDEVGAGV
NRTLLGTIAD AILRLNQERG YTFCVIEHDM DFIGKLCDPV IVMAEGKKLA EGTIDEIKAN
EQVIEAYLGT GLKNKEKTPA
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