| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1513 |
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| Symbol | |
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| ID | 5713170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1576115 |
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| End bp | 1576882 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267428 |
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| Product | putative tRNA/rRNA methyltransferase |
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| Protein accession | YP_001532856 |
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| Protein GI | 159044062 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.217497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.686219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGG CCATGACCGA CACGCCTTCC CAACCGGCCT TCGTGCTCGT GCGCCCGCAG
ATGGGCGAGA ATATCGGCGG CTCCGCCCGT GCCATGTGGA ACTTCGGGCT CGACCGGATG
CGGGTCGTGG CCCCCCGGGA CGGCTGGCCC AGCGAGAAGG CCGTCGCCAT GGCCTCCGGC
GCGGGACGGC TGCTGGACGA AGCGGGGCTT TATGGCAGCA CCGCGGAGGC GCTGGCCGAT
GCCGATTACG TCTTTGCCAC CACCGCCCGG CCCCGCGACC TGACCAAGCC CGTGGTCACG
CCGGAGCGCG CCATGGAACA GGCCCGCGCC CTGATCGCCG AAGGCCAGCG GGTCGCGGTC
CTGTTCGGGC CGGAGCGCGC GGGCCTGGAA AACGAAGACA TCGCGCTGGC AAACGCGATT
GTCTCGGTCC CCGTCAACCC GGCCTTTCCG TCGCTGAACC TCGCGCAATG CGTGCTGTTG
ACGGCCTATG AATGGGGCCG CCAGACCACC GATACGCCCG CGGAAGTGAT GGAGATGGCC
GGCACGCGCT ACGCCAACGG GGCGGAGATC ACGGCCCTTG GCGACCATTT CGAGACGCGG
ATGGAGGAGG CCGGGTTCTT CTTCCCCGAC CACAAGGCCG AGAGCATGAA GCTGAACATG
CGCAACATGT GGTCGCGCCT GCCCCTGACG CTCGCGGATG TGCAGACCCT GCACGGGGTG
CTGCGGCAAC TCGTACGCTG GAAGGATCGC TCCGGGGGCG CATCTTGA
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| Protein sequence | MTRAMTDTPS QPAFVLVRPQ MGENIGGSAR AMWNFGLDRM RVVAPRDGWP SEKAVAMASG
AGRLLDEAGL YGSTAEALAD ADYVFATTAR PRDLTKPVVT PERAMEQARA LIAEGQRVAV
LFGPERAGLE NEDIALANAI VSVPVNPAFP SLNLAQCVLL TAYEWGRQTT DTPAEVMEMA
GTRYANGAEI TALGDHFETR MEEAGFFFPD HKAESMKLNM RNMWSRLPLT LADVQTLHGV
LRQLVRWKDR SGGAS
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