Gene Dshi_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1510 
SymbolrecG 
ID5712689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1570952 
End bp1573042 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content70% 
IMG OID641267425 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_001532853 
Protein GI159044059 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.308566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.659552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCC GCCCCGCGGC GCTCTTCCCG CTCTTTGCAG AGCTGGAAAC CCTGCCCGGC 
ATCGGCAAGA AGACGGCGCA GACATTGGCG CATATGGACA TCGCGCGGCC GCGGGACCTG
ATCTTCACCC TGCCGAGTTC GGGCATCGAA CGGCGGCTGG TCGATACGGT GCAGACCGGC
CCGTTCCCGT CGGTGATGAC CGTGCCCGTG ACCGTCACCC GCCACCTGCC GCCCTCGGGC
AAGGGCCGCC CCTACCGGAT CGAGGTCGCC GATGCCGCGA CCACGATCAC GCTGGTCTAT
TTCCACGCCC GGGGCGACTA CCTGATGAAG CTGCTGCCCC CGGGGGCGCG GCGGATCATC
TCGGGCCGCG TGGAGCTTTA TGACGGTCAG GCCCAGATGC CGCATCCAGA CCACGTCTTG
ACCGAGGCGG AGGCCGAAAC CCTCGGCGGG TTCGAGCCGG TTTATCCCCT GACCGCCGGG
ATCACGCAAA AGACGATGCA GAAGGCCGTG GCGGGGGCCC TGGACCGCGT GCCGGATCTG
GCCGAATGGG CCGACCCCGC TCTCGTGGCG CAGGAAGGCT GGCCCGATTT CGCCTCCGCG
CTGGCCTCGG CCCATGCGCC GCAGTCGATG AAAGAGCTTG GGCCCGACAC GCCCGCGCGG
CGGCGGCTGG CCTATGACGA GTTGCTGGCC CATCAGACCA CGCTGGCCCT GGCCCGGGCG
CACCGCCGCC GGGCCCCGGG GCGGCGGTTG ACGGGCGACG GGCGGCGGGT CGGGCCGGTG
CTCGCCGCAC TGCCCTACAC CCCCACCGGC GCGCAGCAGC GGGTGATTTC CGAGATCACC
GAGGACCTCG CAGCCCCCCA CCGGATGAAC CGGCTGCTGC AGGGCGATGT GGGCGCGGGC
AAGACCCTGG TCGCCCTGGT CGCAATGTTG CTGGCGGTGG AGGCGGGGAC ACAGGCGGTG
ATGATGGCGC CCACCGAGAT CCTCGCGCGG CAGCATCTGG CGGCGCTTCT GCCGCTGGCC
GAGGCGGCGG GCGTGGTGGT CGAGGTGCTG ACGGGCCGCG ACAAGGGGCG GGAACGGGCG
GCCAAGCTCG CCGCCCTGGC CGCCGGGGAC ATCCATATCC TCGTGGGCAC CCATGCGGTG
TTCCAGGACG ATGTCGCCTT CCACGATCTG GGCCTTGCGG TGATCGACGA ACAGCACCGC
TTCGGGGTGC GCGAACGGAT GCGGCTGGGG GCCAAGGGGG CGGCGGTCGA TGTGCTGGTG
ATGACGGCCA CGCCGATCCC GCGGTCCCTG GCGCTGGTGA CCTATGGCGA CATGGATGTC
TCGATCCTCG ATGAAAAACC CCCGGGCCGC ACGCCGGTGA AAACCGCGCT GGTCTCGGCC
GACCGGCTGG ACGAGTTGCT CGCCCATCTC GACGCGGCAC TGTCGGAGGG GCGCCAGGTC
TATTGGGTCT GCCCCCTGGT CGAAGAGAGT GAAACCCTCG CCCTGACCGC CGCGGAAGAG
CGGTTCAAGC ATCTGCGCGC GCGGTTCGGC GAGGGGCGGG TCGGGCTGGT CCATGGCCAG
ATGCCCGTGG CCGAGAAGGA CGCGGCCATG GCGGATTTCG TGGCGGGCGA GACGCGATTG
CTGGTCGCGA CCACGGTGAT CGAGGTGGGC GTGGACGTGC CGAACGCGTC GATCATGGTG
ATCGAAGGGG CGGAGCATTT CGGGCTTGCC CAGCTTCACC AGTTGCGCGG CCGGGTGGGG
CGGGGCAGCA CCGCGTCGAG TTGCCTGCTG CTCTATGCGC CGCCCCTGGG CGAGACGGCG
ACCAAGCGGC TCAAGCTGAT GCGGGAGACC GAGGACGGCT TCCGGATCTC GGAGGCGGAT
ATGGAGATGC GCGGGGCAGG GGATCTGATC GGCACCGCGC AATCGGGTCT GCCCCGGTTC
CGCATCGCCG ATCTCGAACG CCAGGCCGGG CTGATGGCGA TGGCGCAATC GGATGCCCGG
GCGCTGCTGG CCAAGGATCC CAAGCTCGAC AGTCCGCGGG GCGAGGCAGT TCGCATGCTG
CTGTGGCTGA CCGGGCAGGA CGAGGCGATC CGCCTGATCT CCGTGGGGTA G
 
Protein sequence
MSSRPAALFP LFAELETLPG IGKKTAQTLA HMDIARPRDL IFTLPSSGIE RRLVDTVQTG 
PFPSVMTVPV TVTRHLPPSG KGRPYRIEVA DAATTITLVY FHARGDYLMK LLPPGARRII
SGRVELYDGQ AQMPHPDHVL TEAEAETLGG FEPVYPLTAG ITQKTMQKAV AGALDRVPDL
AEWADPALVA QEGWPDFASA LASAHAPQSM KELGPDTPAR RRLAYDELLA HQTTLALARA
HRRRAPGRRL TGDGRRVGPV LAALPYTPTG AQQRVISEIT EDLAAPHRMN RLLQGDVGAG
KTLVALVAML LAVEAGTQAV MMAPTEILAR QHLAALLPLA EAAGVVVEVL TGRDKGRERA
AKLAALAAGD IHILVGTHAV FQDDVAFHDL GLAVIDEQHR FGVRERMRLG AKGAAVDVLV
MTATPIPRSL ALVTYGDMDV SILDEKPPGR TPVKTALVSA DRLDELLAHL DAALSEGRQV
YWVCPLVEES ETLALTAAEE RFKHLRARFG EGRVGLVHGQ MPVAEKDAAM ADFVAGETRL
LVATTVIEVG VDVPNASIMV IEGAEHFGLA QLHQLRGRVG RGSTASSCLL LYAPPLGETA
TKRLKLMRET EDGFRISEAD MEMRGAGDLI GTAQSGLPRF RIADLERQAG LMAMAQSDAR
ALLAKDPKLD SPRGEAVRML LWLTGQDEAI RLISVG