| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1508 |
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| Symbol | ctrA |
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| ID | 5712687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1567977 |
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| End bp | 1568690 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641267423 |
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| Product | cell cycle transcriptional regulator ctrA |
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| Protein accession | YP_001532851 |
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| Protein GI | 159044057 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.469708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.710734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC TGATCATCGA AGACGACCCG ACAACGGCGA AGAGCATCGA GTTGATGCTG
ACCCACGCCA ATCTGAACGT CTACTGTACG GCCATGGGCG AGGAGGGGAT CGATCTTGCC
AAACTCTATG ACTACGATCT GATCCTGCTG GACCTCGGCC TGCCGGACAT GACCGGGCAC
GAAGTGCTGC GTCAGATCCG GCTGGCCCGG ATCGAGACGC CGATCCTGAT CCTGTCGGGC
GCCGACGATA CCGAAAGCAA GATAAAGGGT TTCGGCTTCG GCGCCGACGA CTATCTGACA
AAGCCCTTCC ATCGCGAAGA ATTGGTCGCG CGGATCCACG CGATCATCCG CCGGTCCAAG
GGGCATTCCC AGTCGGTCAT CAAGACCGGC GAAATCCTCG TCAATCTCGA CGCCAAGACG
GTGGAAGTCG ATGGGATGCA GGTCCATCTG ACCGGCAAGG AATACCAGAT CCTCGAGCTG
CTGTCGCTGC GCAAGGGCAC GACCCTGACC AAGGAGATGT TCCTCAACCA TCTCTACGGC
GGCATGGACG AGCCCGAGCT GAAGATCATC GACGTGTTCA TCTGCAAGCT GCGCAAGAAG
CTCAGCCAGG CCACGGGCGG CGAGAACCAT ATCGAAACTG TCTGGGGCCG CGGCTACGTG
CTGCGCGATC CGGACCCCGT CGAAGCACCG GCGCCGCAAC TCGCCACCGG TTGA
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| Protein sequence | MRILIIEDDP TTAKSIELML THANLNVYCT AMGEEGIDLA KLYDYDLILL DLGLPDMTGH
EVLRQIRLAR IETPILILSG ADDTESKIKG FGFGADDYLT KPFHREELVA RIHAIIRRSK
GHSQSVIKTG EILVNLDAKT VEVDGMQVHL TGKEYQILEL LSLRKGTTLT KEMFLNHLYG
GMDEPELKII DVFICKLRKK LSQATGGENH IETVWGRGYV LRDPDPVEAP APQLATG
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