| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1495 |
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| Symbol | uppS |
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| ID | 5712674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1554231 |
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| End bp | 1554962 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267410 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001532838 |
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| Protein GI | 159044044 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.595804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.585413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCACG CACCGAAACC AAAGCCCCCG GCAGAGGGTC CGCGCCATGT GGCGATCATC
ATGGATGGCA ACGGACGCTG GGCGCAGCAA CGCGGACGCC CGCGCCTGTT CGGTCACCAG
GCCGGGGCAA GGCGGGTGCG CGCGGTGGTG GAGGCCTGCC CCGATCTGGG GATCGAGTAC
CTGACGATCT TCGCCTTTTC GACCGAGAAC TGGAAGCGCA CGCAGTCCGA GGTCTCGGGC
CTGATGGGGC TGTTCCGGCG CTACATCACC AAGGAGATGG AAGGTTTCCT GCGCGAAGGG
GTGCGGGTGC GGTTCATCGG GGACCGGATC CGGCTGGACC CGAAACTGCG CGAGTTGATG
GACGAGGTGG AAACGCTGAC GGCCCATAAT TGCCGCGTGA ACCTGACGAT CGCCCTGAAT
TACGGCGGCC GGGACGAGGT GGCGCGCGCC ACCAAGCGCC TGGCCCAGGA GGTCGCCGCC
GGGCGGCTCG ATGCGGAGTG CGTGGACGAG ACCACCCTGA CCCGGTTTCT CGACACCTGT
GTGCTGCCGG ACCCGGACCT GGTGATCCGT ACCTCCGGGG AGGCGCGGAT TTCGAACTTC
CTGCTGTGGC AGTCGGCCTA TGCGGAGTAC GAGTTCATCG ACACGCTCTG GCCCGATTTC
ACGCCCGAGA TCTTCGCCGA AGTGGTCGAG CGGTTCGGCG GGCGCGCGCG CCGCTTCGGC
GCCGTGCTCT AG
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| Protein sequence | MQHAPKPKPP AEGPRHVAII MDGNGRWAQQ RGRPRLFGHQ AGARRVRAVV EACPDLGIEY
LTIFAFSTEN WKRTQSEVSG LMGLFRRYIT KEMEGFLREG VRVRFIGDRI RLDPKLRELM
DEVETLTAHN CRVNLTIALN YGGRDEVARA TKRLAQEVAA GRLDAECVDE TTLTRFLDTC
VLPDPDLVIR TSGEARISNF LLWQSAYAEY EFIDTLWPDF TPEIFAEVVE RFGGRARRFG
AVL
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