Gene Dshi_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1494 
Symbolfrr 
ID5712673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1553599 
End bp1554165 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID641267409 
Productribosome recycling factor 
Protein accessionYP_001532837 
Protein GI159044043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.280653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.717223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG AAGATTTCGA CCTCGATCTC GATGACCTCA AGCGCCGGAT GGACGGCGCG 
CTCGCCTCCC TGCGTACGGA GTTCGCCTCT CTCAGGACCG GTCGCGCCTC GGCGTCGATG
CTGGAGCCGG TGATGGTGGA TGCCTACGGG CAGAAAACCC CCATCAACCA GGTCGGCACC
GTCAACGTGC CCGAACCCCG GATGGTGACG ATCAATGTCT GGGACAAGAG CCTCGTGGGC
AAGGTGGAGA AGGCGATCCG CGAAAGCGGG CTGGGGATCA ACCCGCAGCT CAACGGCACG
ATCATCATGC TGCCGATCCC GGAGCTGAAC GAGGAGCGCC GGCGCGAGCT GACCAAGGTC
GCTGCGCAAT ATGCCGAGCA CGCCCGCGTG GCGATCCGCA ACGTGCGCCG CGACGGCATG
GACCAGCTCA AGAAATTCAA GGCCGACGGC ATGAGCGAGG ACGATCACAA GATCTGGTCC
GACGAGGTGC AGGCCCTGAC CGATGCCGAG ATCAAGAAGG TCGATGACGC TCTGGAGAAC
AAGCAGAGCG AGATCATGCA GGTCTGA
 
Protein sequence
MSDEDFDLDL DDLKRRMDGA LASLRTEFAS LRTGRASASM LEPVMVDAYG QKTPINQVGT 
VNVPEPRMVT INVWDKSLVG KVEKAIRESG LGINPQLNGT IIMLPIPELN EERRRELTKV
AAQYAEHARV AIRNVRRDGM DQLKKFKADG MSEDDHKIWS DEVQALTDAE IKKVDDALEN
KQSEIMQV