Gene Dshi_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1484 
Symbol 
ID5712663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1538907 
End bp1539512 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content76% 
IMG OID641267399 
Producthypothetical protein 
Protein accessionYP_001532827 
Protein GI159044033 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.205253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.364405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA TCGCCCTCCT CCTCGCCGCC GGCGCCTCGT CGCGCATGCG CGGCCGCGAC 
AAGCTGATGG AGCTTGTGGA CGGCACCCCC CTCGTCGCCC GCCAGGCCGC CCTCGCGGCC
TCCGTGGTCC CGCATGTCCT CGTCGCCCTG CCGCCCGCGC CGCACCCGCG CCACGCCGCG
CTGGATGGGC TCGACGTCAC CCGCCTGAGC CTGCCCGACA GCGCCGAGGG CATGGGCGGC
ACCCTGCGCG GTGCTGTCGC CCGCCTGCCC GCCGATTGCA CGGGCCTGCT GCTGCTGCTT
GGAGACTTGC CGGAAATCAC CGCCGAGGAC CTGCGCGCCG TCCTCGCCGC GCGCCGCACC
CACCCGCAGG CCCGCATCTG GCGCGGGGCC ACCGAGGACG GCGCTCCGGG CCACCCGATC
CTCTTTGCCC CCGACACCTT CCCCGATTTC GCGCGGCTTT CCGGCGATGC GGGCGGCCAG
TCCGTGATCG CCAGGCACCG CGACCACCTG CACCTCGTGC CCCTGCCCGG CACCCGCGCC
CGCCGCGACC TCGACACGCC GGAAGACTGG GCGGCCTGGC GGGACATGCG CTCCCAAACG
CCCTGA
 
Protein sequence
MADIALLLAA GASSRMRGRD KLMELVDGTP LVARQAALAA SVVPHVLVAL PPAPHPRHAA 
LDGLDVTRLS LPDSAEGMGG TLRGAVARLP ADCTGLLLLL GDLPEITAED LRAVLAARRT
HPQARIWRGA TEDGAPGHPI LFAPDTFPDF ARLSGDAGGQ SVIARHRDHL HLVPLPGTRA
RRDLDTPEDW AAWRDMRSQT P