Gene Dshi_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1481 
Symbol 
ID5712659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1536263 
End bp1536844 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content69% 
IMG OID641267395 
Producthypothetical protein 
Protein accessionYP_001532824 
Protein GI159044030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0572802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.376105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAC CCACCTGGGA GGCCCGGACG GGCCGGGCGC TGGAAGCGCT GGCGCGCGCC 
ATGGCCTATG GCGGCGGGCT GGTGCTGGTG GCGATTGCGG TGATCACCGT GGCGTCGATC
ATCGGGCGGG CGCTGATCGG GCTGGGCCTG GGGCCGATCA CCGGGGATTT CGAGCTGGTG
GAGGCGGGCT GCGCGGTGGC GATCTTCGCG TTTCTGCCCT GGTGCCAGCT CAAGCGCGGG
CATGTGACGG TGGATATCTT CGTGGACCGG CTGCCGCCGC GGATCCATGC GCTGACCGGG
CTGATCGGTG ACGGGCTGAT CGCGCTGGCG GCGGGCGTGA TCTTCTGGCG GCTGTGGCTG
GGGTTCGGGG AGAAGTTTCC CTATGGCTCC GAGGGGCTGC GGGAGGCGCT CGGGATGGGC
TTCAAGCCGT TCTTTCCCGA GACGACCTAT GAGCTGGAGC TGCCGGTGTG GATCCCTTAT
GCGCTGGCGG TGACCGGGGC GGCGGTGTTC CTGGTCGTGG CGCTCTATAC GGTGTGGCGC
AGCCTGAACT GGGTGCTTGC CGGGCGGGAG GGCCGGGCAT GA
 
Protein sequence
MIAPTWEART GRALEALARA MAYGGGLVLV AIAVITVASI IGRALIGLGL GPITGDFELV 
EAGCAVAIFA FLPWCQLKRG HVTVDIFVDR LPPRIHALTG LIGDGLIALA AGVIFWRLWL
GFGEKFPYGS EGLREALGMG FKPFFPETTY ELELPVWIPY ALAVTGAAVF LVVALYTVWR
SLNWVLAGRE GRA