| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1479 |
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| Symbol | |
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| ID | 5712657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1534029 |
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| End bp | 1534640 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267393 |
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| Product | exopolysaccharide synthesis ExoD |
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| Protein accession | YP_001532822 |
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| Protein GI | 159044028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.438541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.222219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAT CGCCCGAGCA TTTCGCGATA TCCCACCGCC TGCACCAGTT GGCGGCGGAT
GCGAACGGCC CCTCCGTGTC GCTGGGCTGG GTCATGTCGC AGCTTCACGA ACGGGCGTTC
GGCCTGTTCC TGTTGATCCT CGCCCTGCCC TGCTGCATCC CCTTTCTCTA CGGCATTCCG
CAGATCGTCG CCCTGCCGCT GATGTTCGTC TCCGCCCAGA TCCTGTTCGG ACGGCAGACC
CCCTGGCTGC CCGAGCGCCT GAGCACGCGC GAGGTTCAGA CCGAGGCGCT GTCGCGCCTT
GCGGCGCGCG CGGAGCCTTG GCTGCACCGG ATCGAGGCCG TCAGCCGCCC CCGTCTTGCC
GCCCTGACCC ATGGGCCCGC CGACCGCATC GTCGGGCTGG CGCTGGTCCT GTTCAGCGCG
TCGATCCTGG TGCCGCTGCC GTCGACCAAC ACCGTGCCCG GCTTCGCGGT CGTCATCATC
GCCATGGGCC TGTTGCAGCG GGACGGGATC CTCGTCATCC TGGGCACGCT CCTGGGCACA
GCCTGGATCG GGGCGCTGAT CGTGGCCGGA GCGACCCTGA TCAGCTTGCT CACGTCATGG
ATCGGCCTGT GA
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| Protein sequence | MPSSPEHFAI SHRLHQLAAD ANGPSVSLGW VMSQLHERAF GLFLLILALP CCIPFLYGIP
QIVALPLMFV SAQILFGRQT PWLPERLSTR EVQTEALSRL AARAEPWLHR IEAVSRPRLA
ALTHGPADRI VGLALVLFSA SILVPLPSTN TVPGFAVVII AMGLLQRDGI LVILGTLLGT
AWIGALIVAG ATLISLLTSW IGL
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