Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1470 |
Symbol | |
ID | 5712648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | - |
Start bp | 1525195 |
End bp | 1525809 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641267384 |
Product | hypothetical protein |
Protein accession | YP_001532813 |
Protein GI | 159044019 |
COG category | [S] Function unknown |
COG ID | [COG5385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0384099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0350114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGC CTGGGGGGAC TCAGGCGCGC AGCGATCTGA GCGCGCTGAT CGGATCTCGC ATCTGTCACG ATCTTATTAG CCCATTGGGC GCGATCGGCA ATGGTCTGGA GCTTTTGCAG ATGTCCGGGG CGTCCGAAAG CCCGGAAATG ACCCTGATCG CAGACAGCGT CACCAGCGCC AATGCCCGGA TCCGGTTTTT CCGGATCGCC TATGGCGACG CGGTGCAGAA CCAGATGATC AAGGGCGCGG AATTGCGCGG TGCGCTCCAT GGCAGCTACC AGGGCAGCCG GTTGCAGATC GACTGGCAGC CGGAGGACAT GCTGCGGTCG ACCGCCAAGC GCGGGTTCCT GGCGTTGCAA TGCCTGGAGA CGGCGATGCC CTATGGCGGG CGCATCCGCG CGGTGGATGT GGGCGCGCGC GGCCTGGTCT TCGAGGGCAG CGCGGAGCGT TTTGCCTATG ACGCGACCTT GTGGGAGGGG CTGACACAGA ACGGCCCCTG GGACGGGGTC CGGCCCGCAC AGGTGCAATT TCCCCTGCTG GCCGAACTGG CGCGGGAGGC CGGGAATGCC ATCTCCGTAT CGAGGACCGA CGCGACGCTG ACCCTGAGTG TCTGA
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Protein sequence | MDEPGGTQAR SDLSALIGSR ICHDLISPLG AIGNGLELLQ MSGASESPEM TLIADSVTSA NARIRFFRIA YGDAVQNQMI KGAELRGALH GSYQGSRLQI DWQPEDMLRS TAKRGFLALQ CLETAMPYGG RIRAVDVGAR GLVFEGSAER FAYDATLWEG LTQNGPWDGV RPAQVQFPLL AELAREAGNA ISVSRTDATL TLSV
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