Gene Dshi_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1470 
Symbol 
ID5712648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1525195 
End bp1525809 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID641267384 
Producthypothetical protein 
Protein accessionYP_001532813 
Protein GI159044019 
COG category[S] Function unknown 
COG ID[COG5385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0384099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0350114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC CTGGGGGGAC TCAGGCGCGC AGCGATCTGA GCGCGCTGAT CGGATCTCGC 
ATCTGTCACG ATCTTATTAG CCCATTGGGC GCGATCGGCA ATGGTCTGGA GCTTTTGCAG
ATGTCCGGGG CGTCCGAAAG CCCGGAAATG ACCCTGATCG CAGACAGCGT CACCAGCGCC
AATGCCCGGA TCCGGTTTTT CCGGATCGCC TATGGCGACG CGGTGCAGAA CCAGATGATC
AAGGGCGCGG AATTGCGCGG TGCGCTCCAT GGCAGCTACC AGGGCAGCCG GTTGCAGATC
GACTGGCAGC CGGAGGACAT GCTGCGGTCG ACCGCCAAGC GCGGGTTCCT GGCGTTGCAA
TGCCTGGAGA CGGCGATGCC CTATGGCGGG CGCATCCGCG CGGTGGATGT GGGCGCGCGC
GGCCTGGTCT TCGAGGGCAG CGCGGAGCGT TTTGCCTATG ACGCGACCTT GTGGGAGGGG
CTGACACAGA ACGGCCCCTG GGACGGGGTC CGGCCCGCAC AGGTGCAATT TCCCCTGCTG
GCCGAACTGG CGCGGGAGGC CGGGAATGCC ATCTCCGTAT CGAGGACCGA CGCGACGCTG
ACCCTGAGTG TCTGA
 
Protein sequence
MDEPGGTQAR SDLSALIGSR ICHDLISPLG AIGNGLELLQ MSGASESPEM TLIADSVTSA 
NARIRFFRIA YGDAVQNQMI KGAELRGALH GSYQGSRLQI DWQPEDMLRS TAKRGFLALQ
CLETAMPYGG RIRAVDVGAR GLVFEGSAER FAYDATLWEG LTQNGPWDGV RPAQVQFPLL
AELAREAGNA ISVSRTDATL TLSV