Gene Dshi_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1463 
Symbol 
ID5712641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1519374 
End bp1519913 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID641267377 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001532806 
Protein GI159044012 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0311818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACG AAACGATCGC ACCCGCAGCG GCCATTCCGG CCAAGCGATT CATCCTGCGG 
CCCCTGCGGG CGTCGGATGC CGGGCTGATG GCGCTCTATA CCAGCGACAA GCGCGTGGCG
GAGGGCACGA CATCGATCCC CCATCCGCTG CCCCCCGGTA CGTCGGAGGC CTTCATCGCC
CGCGTGATCG CACCGGGCAG CGACGAGATC GTCTGGGCCA TCGACGCGTC GGAGTTCGGC
GGGGGGGAGC TGCTGGGCGT GATCTCCCTC AAGCGCATGG ACCGCGGCCA GTCCGAGATC
AGCTACTGGG TGGCGCCCGC CTGCTGGAAC GCCGGGTTCG CGAGCGAGGC GGTGCACGCG
CTCGTGGATG CCAACCCCTT GGCGAACAAG ACGATCTTCG GCGCGGTCTT CCAGGACAAC
CCGGTCTCGG CGCGGGTGCT GACCAATGCG GGCTTCGACT ATCTCGGCGA TGCGGAGGCG
TTTTCCGTGG CGCGCAACGC CAAGGTGCCG ACCTGGACCT ACCTCAAGAC CGTGGACTGA
 
Protein sequence
MSYETIAPAA AIPAKRFILR PLRASDAGLM ALYTSDKRVA EGTTSIPHPL PPGTSEAFIA 
RVIAPGSDEI VWAIDASEFG GGELLGVISL KRMDRGQSEI SYWVAPACWN AGFASEAVHA
LVDANPLANK TIFGAVFQDN PVSARVLTNA GFDYLGDAEA FSVARNAKVP TWTYLKTVD