Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1463 |
Symbol | |
ID | 5712641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1519374 |
End bp | 1519913 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641267377 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001532806 |
Protein GI | 159044012 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0311818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACG AAACGATCGC ACCCGCAGCG GCCATTCCGG CCAAGCGATT CATCCTGCGG CCCCTGCGGG CGTCGGATGC CGGGCTGATG GCGCTCTATA CCAGCGACAA GCGCGTGGCG GAGGGCACGA CATCGATCCC CCATCCGCTG CCCCCCGGTA CGTCGGAGGC CTTCATCGCC CGCGTGATCG CACCGGGCAG CGACGAGATC GTCTGGGCCA TCGACGCGTC GGAGTTCGGC GGGGGGGAGC TGCTGGGCGT GATCTCCCTC AAGCGCATGG ACCGCGGCCA GTCCGAGATC AGCTACTGGG TGGCGCCCGC CTGCTGGAAC GCCGGGTTCG CGAGCGAGGC GGTGCACGCG CTCGTGGATG CCAACCCCTT GGCGAACAAG ACGATCTTCG GCGCGGTCTT CCAGGACAAC CCGGTCTCGG CGCGGGTGCT GACCAATGCG GGCTTCGACT ATCTCGGCGA TGCGGAGGCG TTTTCCGTGG CGCGCAACGC CAAGGTGCCG ACCTGGACCT ACCTCAAGAC CGTGGACTGA
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Protein sequence | MSYETIAPAA AIPAKRFILR PLRASDAGLM ALYTSDKRVA EGTTSIPHPL PPGTSEAFIA RVIAPGSDEI VWAIDASEFG GGELLGVISL KRMDRGQSEI SYWVAPACWN AGFASEAVHA LVDANPLANK TIFGAVFQDN PVSARVLTNA GFDYLGDAEA FSVARNAKVP TWTYLKTVD
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