| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1462 |
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| Symbol | |
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| ID | 5712640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1518721 |
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| End bp | 1519377 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267376 |
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| Product | LysE family transport protein |
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| Protein accession | YP_001532805 |
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| Protein GI | 159044011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0346145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGC AGCATTCCGT CCCGCATCGC GCAACCCGAA AGTCCCCCAT GAGCGTCGCC
ATCGGCAGTT TCCTCGTTTT CGCCGCCAGC CAGGTCGGAA CCCCCGGCCC GGCGAACATG
GCGTTGATGG CCACCGGCGC GCGGTTCGGG CTGCGTCGGG CAGTGCCGTT CCTGGCCGGG
GTGATTGCGG GCAAGCAGTT CATCATCTGG CCCATGGGGT TCGGCCTGCT GGCGCTCGGC
ACGAGGCAGC CATGGATTTT CGAGACCCTG AAATGGGTAT CGGCGGCTTA TATCTGTTAT
CTTGCCTGGC GCGTGACCCG GTTGCGTCTC GGCACACCCG AGGCCGAAGG CGCCCCCGCG
CCGGGATTTG CCGCCGGGCT GATCGTGCAC CCGCTCAACC CCAAGGCCTG GGCGATGATC
ACCGCGGGCT TCACCAGCTT CACCGCCCCC GGCACGCCTG CGCTGCAGGC CACGCTGACC
ATCGCGCTCT GCCTTCTGGC CTGCCAGATC GTGCTGCAGC CGATCTGGGC CTGGGGCGGG
TCGGCCATGG CGGCCCGGGT CGCGGGCACC GCGGTGGAGC CGATCTTGAT GTATGTCCTG
GCGGGCCTGA CGCTCGCCAG CGTCCTTTAT GTGCTGTTCG GAGGAGGACC AGCATGA
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| Protein sequence | MQSQHSVPHR ATRKSPMSVA IGSFLVFAAS QVGTPGPANM ALMATGARFG LRRAVPFLAG
VIAGKQFIIW PMGFGLLALG TRQPWIFETL KWVSAAYICY LAWRVTRLRL GTPEAEGAPA
PGFAAGLIVH PLNPKAWAMI TAGFTSFTAP GTPALQATLT IALCLLACQI VLQPIWAWGG
SAMAARVAGT AVEPILMYVL AGLTLASVLY VLFGGGPA
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