| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1440 |
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| Symbol | |
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| ID | 5712617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1495960 |
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| End bp | 1496892 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267353 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532783 |
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| Protein GI | 159043989 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.820273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATTATG TTGCAGCCAT GGACATCACG CTCTTTCGCG ATCTCGACCG GCTGCGGCAA
ACCGGAAATT TCTCCCAGGC CGCGGCGCTG GTCAATCTCA GCCAACCGGC CTTCAGCCGC
CGGATCAAGT CCCTTGAGAA ATGGGTGGGC GCGGTTCTGG TCGATCGCTC GCGTCAGCCG
GTGGTGCTGA CCGAGGCAGG AACCCAGATG CTGGAGGCGG GGATGCAGGC GCTGGCCCGG
ATCGAGCAGG AGCGCAGCCA GATCCGGGAG GCACAATCCC TGCCGGACAA ATACGTGGTG
ACCTTCGCCA CCCAGCATTC CATCGGCTGG CGCTTCTATC CGGCCTGGTT GCAGGCGCTG
GAAGAGGCTT ACGGGCCCAT CTTGTCGCGC CTGCGGGCGG ATGATCTGCC CAACTGCCTG
AATGACCTCA AACAGGGCGC CGTGGATTTC GTCATCGCCT ACGCCAGCGC CGAAATCCGC
CCCCAGGCCG GGCAGCCGGG CGTGCGGATC GGGTCGGATG ACCTGATCCC GGTCTGCAAG
CCCGACGGGG CGGGCGCGCC GATCTACGAT TGCGCCGCCG CCGGGGTGCG GATGCCCTTC
CTGCGGTTCG GGGATGCCGC GCCGATCGGG ATGCATCTGG AGCCGCTCTT TGCCGCTCAC
GGCCTGCGCA GCCGGTTTCG CACGGTCTAC GAGAATTCCA TGGCGGGGGC CTTGCGGATC
CGGGCGCGGG CGGGCGACGG GGTGGCCTGG CTGCCCCATA GCCTCGTCGC ACCGGACTTG
GCCGGTGGTC TGCTGGTGCG TACCGGCCCG CCGGATTGGG ACATCCCCCT CGAGATCCTG
ATCTACCGGA ACGCCGAGCG GTCCAACCGC GTGACCCGCG CGCTCTGGTC CTTTCTGGAG
GTTCGGCAGG CGGTCAGCCT CGTGCCTGCC TGA
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| Protein sequence | MHYVAAMDIT LFRDLDRLRQ TGNFSQAAAL VNLSQPAFSR RIKSLEKWVG AVLVDRSRQP
VVLTEAGTQM LEAGMQALAR IEQERSQIRE AQSLPDKYVV TFATQHSIGW RFYPAWLQAL
EEAYGPILSR LRADDLPNCL NDLKQGAVDF VIAYASAEIR PQAGQPGVRI GSDDLIPVCK
PDGAGAPIYD CAAAGVRMPF LRFGDAAPIG MHLEPLFAAH GLRSRFRTVY ENSMAGALRI
RARAGDGVAW LPHSLVAPDL AGGLLVRTGP PDWDIPLEIL IYRNAERSNR VTRALWSFLE
VRQAVSLVPA
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