| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1436 |
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| Symbol | |
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| ID | 5712613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1491145 |
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| End bp | 1492686 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267349 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001532779 |
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| Protein GI | 159043985 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.14374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.536593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA GCGACATCAA TCCGCTCGAA GACACCGAGA GCGCCGCGGC CCTCGCCTAT
GCCGCCGACC GGCGCGCCAA TATCGCGACC TTCGTGCGCA CCAACCCGGA TTACTACGCG
GCGATGTTCG ACAAGATCGG CGCATCGTCA AAATTCGTGC CCACGATCAA TCTCATGGCG
GGGCTGTTCG GGCCGGTCTG GTTCGGGGCG CGGGGATTGT GGAACTGGGC GCTGGCCTTC
CTGATCCTGG AGACGCTCGC GCTGGTACAG ATCGCGCGGG GCCTGTTCGG GGATCTCGCG
GCCGACGCGA TGGCCCGCAT CGCATCGATC GAGGGCACGC TGGAGCTGCG CCGCCAGCAG
CTTGCCGCCG CCATCGAGAG CGGCTCGGAC CGGGTGGACG CCTTCCGGCG CACGGTGGAG
TCGCTGGAGG CCAATATCGG CGGCATCCGC GCCGAGGCCG AGGCCATGGC CGCCGAGGGC
CCCACCATCG CGCTCACCGG GCTCGTCCTC CTGATCCTGG CCAAGATAGC CCAGGCGGTC
ATCGCCAACA CCGCGCTGGA GGCCCGGTTT TCCGAATGGC TGAGCGACCG CAGCATCCGC
TCCGGCATGC CGCCGCAGCA TATCGTGTTG AGCGCCATCT TCATGGGGCT GATCGTGGCC
ACGGCCATGG TCCATTACAG CTTCCCGGGG CGGTTCGACC TCCTCAGCAC CTTCCCGACC
GACCCGGACA TCCGGCTTAC CGGGATCGCC TGGGTGGAGG ATTTCATCGC CTGGACCGTG
CGCAACACCG AAGCTTTCTT CGACGCGCTG ACCTTCGGCA TCCGGACGCT TCTGGACGCG
CTGGAGGTGA TCCTGGTCCA GACCCCGTGG ATCGTGATCG CCAGCCTGAT CGTGCTTCTG
ACCTGGCTCA CCGCGGGCCT GCGCACGGCG ATCTATTCCA GTGCGTTTCT CGCCTATATG
GGGCTTCTGG GCTTCTGGGA GGCGGCGATG ACCACGCTGG CGCTCCTGGG CACGGCGGCG
TGCCTGTCGA TCGTGATCGG CATCCCGCTG GGCATGTTCG CCGCCCGCCG CCCGCGGTTC
TATGCCTTCA TCCAGCCGAT CATGGATTTC ATGCAGACCA TGCCCGCCTT CGTCTTCATG
GTGCCCGTGA TCGCGTTTTT CGGCGTGGGC AAGCCCGCGG CGGTGATCGT GACGATGATC
TTCGGGGGCA CGCCCGTGGT ACGCCTGACC GTGCTGGGCC TGCGCGGGGT GCCCGAGAGC
GTCCGTGAGG CAGCGATCAG CTTCGGCGCG AACAAGTGGT ACCTGCTGAC CAAGGTCGAC
CTGCCATTGG CGGGCCCGTC GATCCGGGCC GGCATCAACC AGACGATCAT GCTGTCGCTG
GCGATGGTGG TCGTTGCCTC GCTGATCGGG GCCAAGGGTC TGGGCGAGGA TGTGCTGGAG
GCGCTGCAAT ACGCCAATGT GGGCCAAGGC ATTCTCGCAG GCTTCTCGAT CCTGTTCTGC
GCGATGATCC TTGACCGGAT CGTGCAGGGC GCGCGCAAGT GA
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| Protein sequence | MKDSDINPLE DTESAAALAY AADRRANIAT FVRTNPDYYA AMFDKIGASS KFVPTINLMA
GLFGPVWFGA RGLWNWALAF LILETLALVQ IARGLFGDLA ADAMARIASI EGTLELRRQQ
LAAAIESGSD RVDAFRRTVE SLEANIGGIR AEAEAMAAEG PTIALTGLVL LILAKIAQAV
IANTALEARF SEWLSDRSIR SGMPPQHIVL SAIFMGLIVA TAMVHYSFPG RFDLLSTFPT
DPDIRLTGIA WVEDFIAWTV RNTEAFFDAL TFGIRTLLDA LEVILVQTPW IVIASLIVLL
TWLTAGLRTA IYSSAFLAYM GLLGFWEAAM TTLALLGTAA CLSIVIGIPL GMFAARRPRF
YAFIQPIMDF MQTMPAFVFM VPVIAFFGVG KPAAVIVTMI FGGTPVVRLT VLGLRGVPES
VREAAISFGA NKWYLLTKVD LPLAGPSIRA GINQTIMLSL AMVVVASLIG AKGLGEDVLE
ALQYANVGQG ILAGFSILFC AMILDRIVQG ARK
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