| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1427 |
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| Symbol | citF |
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| ID | 5712604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1481361 |
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| End bp | 1482908 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267340 |
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| Product | citrate CoA-transferase |
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| Protein accession | YP_001532770 |
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| Protein GI | 159043976 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3051] Citrate lyase, alpha subunit |
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| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.749143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGCG TGAGCGTGAC ACCACAAGGC TCAATCCTAG ACACGGCGCG ATGGCCCGCC
GGGGCCGCCC CGGTGACAAC GCCGCTCGGC TTGCTCCTGC CGGTCGGCAA CCCGGCACCG
GCCCTGTCCG TGTTGCCGCC GCGCGCCGAC GCCGGGGACG GTCGGAAACT GCGCCCGGGT
CTGGAGGTCG TGTTCGACGA GCTCGGGATT GCGGATGGCC GGACCCTGTC CTTTCACCAT
CACTACCGCG ACGGCGACCG GGTGGTTGTC GAGGTGATGC GACTTGCGCG GGAACGCGGG
TTGAAGGGGC TCACGATCTG CCCGAGTTCG ATCTTTCCGA CCCATTCCAG CCTGGTTCCG
TTGCTCGAAG ATGGCACGAT CACAAGCATC GTGACCGACT ACATGCGGGG TCCCGTAGCC
GATTGGATAA CGGCGCATCC CGGACGTGTC ACGGTCCTGC TGCAGAGCCA TGGGGGGCGC
GCGCGGGCCA TCTCATCGGG CCAGTTGAAG ATCGATGTCG CCTTTGTCGG CGCGTCCCTG
GCAGACCGCA GGGGGAACCT GACGGGGCGG GCAGGCGCCC TGGCTTGCGG ACCGCTTGGC
TACCCGGCGG TCGATGCGCA GTATGCAAAG GCCACGGTGG GCATGGCCCA TGACGTGACC
GACGCCGCGC TGCCCCGCGT GGATATTCCC GCCCGGTTTG TGGATCTCGT CGTGCCGTTC
GAGCGCCCCG GAGACGCCAA CCGCATCCGG TCCGGGTCGA CCGTGCCGAG CGAGACGCCG
TTGTCGCGCG GCATCGCAGA GCGGAGTTCG GACATCATCG CGGCGGCGGG GCTGCTGACC
GAAGAGTTCG CCCTTCAAAG CGGGGCGGGG GGCTATTCCC TCGCCGCGGT GCCGCATGTG
GGATCCTTGT TGGCAGCGCA GGGCATGCGC GGCGCCTTCA TGTCGGGCGG GATCACGTCG
GCCCATGTGG AGCTTCTGAG GGCCGGTGTC TTTCGCGCGA TCCGGGATGT GCAGTGTTTC
GACCTCGAAG CCGTACGCTC GGCGATCGAG AACCCCGATC ACCAGATGAT GACAGCCGCC
GAATATGCCA GCCCGCTGCA CCCGAACCCC TGCGTGGACG ACTTGTCGGT CATGCTGCTG
GGCGCGGTCG AGGTGGATTT CGGCTTCAAC GTAAATGTGG TCAGCGGCAC GGATGGCCGG
ATCCTCGGTG GGCCGGGCGG GCATCCCGAT GCGGCCCGGG GGGCGGATCT GAGCATCGTC
TTGACGTCGT TGACGGGCGG CGGGTTTGCC AAGATCGTCC CCGCCGTGCG CTGCGTTTCG
ACGCCGGGCG TGGATGTGGA TGTGGTGGTT ACCGAAGCCG GTTTTGCCAT CAACCCGGCC
CGTGCGGACC TGGTCGCCCG TTTGACGCGG GCGGGACTGA AGCCGGTAGA GATCGAGGAT
CTCGCGCGCA TCGCCGGGGC CCAGGCTGCG CACAGCCCCG CACCCCTTGC CGAGCGTCCG
TCCGTCCATA TCGAGCGCCG CGATGGCCTG ATCCTCGATT GGGTGTAG
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| Protein sequence | MRGVSVTPQG SILDTARWPA GAAPVTTPLG LLLPVGNPAP ALSVLPPRAD AGDGRKLRPG
LEVVFDELGI ADGRTLSFHH HYRDGDRVVV EVMRLARERG LKGLTICPSS IFPTHSSLVP
LLEDGTITSI VTDYMRGPVA DWITAHPGRV TVLLQSHGGR ARAISSGQLK IDVAFVGASL
ADRRGNLTGR AGALACGPLG YPAVDAQYAK ATVGMAHDVT DAALPRVDIP ARFVDLVVPF
ERPGDANRIR SGSTVPSETP LSRGIAERSS DIIAAAGLLT EEFALQSGAG GYSLAAVPHV
GSLLAAQGMR GAFMSGGITS AHVELLRAGV FRAIRDVQCF DLEAVRSAIE NPDHQMMTAA
EYASPLHPNP CVDDLSVMLL GAVEVDFGFN VNVVSGTDGR ILGGPGGHPD AARGADLSIV
LTSLTGGGFA KIVPAVRCVS TPGVDVDVVV TEAGFAINPA RADLVARLTR AGLKPVEIED
LARIAGAQAA HSPAPLAERP SVHIERRDGL ILDWV
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