| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1405 |
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| Symbol | |
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| ID | 5712581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1459097 |
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| End bp | 1460392 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641267317 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001532748 |
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| Protein GI | 159043954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.157932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGA GCGCCCTGAC CGGCAGTCGC ATTCGCGAAA GACGCCAGTC TCTTCGCATC
AAACAGGCCG ATCTCGCCCG GCAGGTCGGA ATCTCCGCCT CCTATCTCAA TTTGATCGAA
CACAATCGTC GCAGAATCGG CGGCAAGGTA CTGGTCAAAC TCGCCCAGGC CTTGCGGGTC
GATATCACCA TCCTGACCCA GGGCGCGGAG GAGACCCTGC TGGAAGGGCT GCGCGAGGCG
GTGGTTTCGG CCCGGCGCAG CACGGCCGAG ATCGACCGGA TCGAGGAATT CGTGGCCCGT
TTTCCCGGCT GGGCGCAGCT GATCGCGGCG CAGCGGCGGC GCATGGTCAC CCAGGAGCGC
ACCATCGAGG CGCTGAACGA CCGGCTGACC CATGACCCGT TCCTGGCCGA GGCGATGCAT
GACCTGCTGT CGAACGTCAC GGCGATCCGG GCGACCGCCT CGATCCTCGC CCAGACCCCG
GAGATCGAAG AGGCCTGGCG CGACCGGTTC CATCGCAACA TGCTGGAGGA AAGCGACAGG
CTGGCCGAGG GCAGCCAGGC GCTGGTGTCC TATTTCGACC GGCAGGTGGG GGCGGAGACC
GCGTTCTCGA CCCCGCAGGA GGCGCTGGAA TCGGTGCTGC TGGAGCATGA TTACCACCTG
CCCATGCTGG AGACCGGGGG CATGGAGGCC GCCGCGGCCC TGCTCGACAA GGCGCCGCAA
CTGGCGATGC CCCAGGCCCG GGCCCTGGCG CTGGCTTATT TCCGCACCTA TGTGCGCGAC
GCCGAGGCGT TGCCCATGCG CCCCTTGCAG GCGGCCTTCG CCGAGGTTCG CGACCCGGCG
CAGCTGGCGC GGCGGTTCGA TGTGGCCCTG CCGGTGGTGA TGCATCGGCT GGCCTGTCTG
CCCAAGGCCA AGGACGCGCC GGATGTGGGG CTGGTGGTGG CGGACACCTC GGGCAGCCTG
CTGTTTCGCA AGGGGATCGA CGGTTTTCCG ATCCCGCGTT TCGGGGCGGC CTGTTCGCTC
TGGTCGGTCT ACCAGGCGCT GACCCAGCCG GTGCAGCCGA TCCGGGTGGC GGTGGAGACG
CCGCCGGGGC GGCGTTTCGT GACCTATGCG GTATCCGAGT TGACCTCGGC CGTGGATTTC
GATGCGCCGC AGGTCTTTCG GTCCTGGATG CTGGTGCTGG ACGCCGGCAA CGCCCCGATG
CCGGAGGAAC GCGCGCGGCC CATCGGCACG ACCTGCCGGA TCTGCCCGCG GGACGCCTGC
GCGGCCCGGC GCGAGCCGTC GATCCTGGCG GACTAG
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| Protein sequence | MPQSALTGSR IRERRQSLRI KQADLARQVG ISASYLNLIE HNRRRIGGKV LVKLAQALRV
DITILTQGAE ETLLEGLREA VVSARRSTAE IDRIEEFVAR FPGWAQLIAA QRRRMVTQER
TIEALNDRLT HDPFLAEAMH DLLSNVTAIR ATASILAQTP EIEEAWRDRF HRNMLEESDR
LAEGSQALVS YFDRQVGAET AFSTPQEALE SVLLEHDYHL PMLETGGMEA AAALLDKAPQ
LAMPQARALA LAYFRTYVRD AEALPMRPLQ AAFAEVRDPA QLARRFDVAL PVVMHRLACL
PKAKDAPDVG LVVADTSGSL LFRKGIDGFP IPRFGAACSL WSVYQALTQP VQPIRVAVET
PPGRRFVTYA VSELTSAVDF DAPQVFRSWM LVLDAGNAPM PEERARPIGT TCRICPRDAC
AARREPSILA D
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