| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1400 |
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| Symbol | |
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| ID | 5712576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1453619 |
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| End bp | 1454374 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641267312 |
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| Product | ABC transporter related |
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| Protein accession | YP_001532743 |
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| Protein GI | 159043949 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.625735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCA AACCGGACTT CTCCAAGGGC ATCAGCCACG CGGAAACCGC ACCGGCCTTC
CTGTCGGTCT GGGACCTGCA CGCCTATTAC GGCGAGAGCT ACATCGTCCA GGGCATCAGC
TTCAATGTCC ACGAGGGCGA GATCCTCGCG CTTCTGGGCC GCAACGGCGC GGGCAAGACC
ACGACCCTGC GCGCCATCGC CCGGCTCGGC GATCCGCAGG TGCGGCATGG CGAGATCTGG
CTCGACCACG CCCGCCTGCA CGAGATGGAA AGCCACGAGG CCGCCGTGGC GGGGCTCGGC
CTCGTGCCCG AGGACCGGCG CATCATCCCC GGCCTGACGG TCGAGGAGAA CCTGCAACTG
GCCCAGATCG TGGAGCCGAA GGGCTGGTCG CTTGACCGGC TCTACGACCT CTTTCCGCGC
CTGGGCGAGC GCCGCAAGCA AGAGGGCGTG ACGCTTTCGG GCGGCGAGCA GCAGATGCTG
TCCATCGCCC GGGCGCTCGC GCGCGATCTC AAGGTGCTGT TGCTGGACGA GCCTTATGAG
GGGCTGGCCC CGGTGATCGT GGACGAGATC GAAAAGACCC TCCGCGTGAT CAAGGAACAG
GGCATGACCA CCGTGATCGT CGAGCAGAAC GCCGTGCGTG CGCTGGAGCT GGCGGACCGG
GCGGTGATCC TCGATACCGG CTCCATCGTG TTCGACGGGG CCGCCGCCGA GGTGCTGGAG
AATGCCGAGC TGCGCGCCGA GTATCTCGCG ATCTGA
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| Protein sequence | MNVKPDFSKG ISHAETAPAF LSVWDLHAYY GESYIVQGIS FNVHEGEILA LLGRNGAGKT
TTLRAIARLG DPQVRHGEIW LDHARLHEME SHEAAVAGLG LVPEDRRIIP GLTVEENLQL
AQIVEPKGWS LDRLYDLFPR LGERRKQEGV TLSGGEQQML SIARALARDL KVLLLDEPYE
GLAPVIVDEI EKTLRVIKEQ GMTTVIVEQN AVRALELADR AVILDTGSIV FDGAAAEVLE
NAELRAEYLA I
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