Gene Dshi_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1359 
Symbol 
ID5711910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1411909 
End bp1412286 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content69% 
IMG OID641267271 
Productprotein of unknown function DUF35 
Protein accessionYP_001532702 
Protein GI159043908 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.907264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.488871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTG ACTTCCTGTC CCACCCGGAC CGCCCCTTTC ATGATGGCCT GGCCGCGGGG 
CGCTTCATGA TCCAGACTTG CCTTGATTGC GGAAAAAGCT GGTCGCCGGC CACCGGTCGC
TGCGGGGCTT GTGGCGAAAC CCAGTTGCAA TGGCGCGCGG CCAGCGGGAT AGGCACCCTG
CAACGGACTA TCCCCCTGGG TGACGAGTCG GCCTTCGGCG ATGATCCGGA CGCCACGCGG
GCCATTGGGG CGGTGCGCCT GGCCGAAGGC CCGACCGTCA GCGTCCGGAT TGCGGGCCCC
GTGCCGGATG TTGGCGCCCT TGTCGCGATC GAGGTCCTGG GCGGCGCCCT GATCGCCCGT
GCGCCCTCAG GGGTGTGA
 
Protein sequence
MSFDFLSHPD RPFHDGLAAG RFMIQTCLDC GKSWSPATGR CGACGETQLQ WRAASGIGTL 
QRTIPLGDES AFGDDPDATR AIGAVRLAEG PTVSVRIAGP VPDVGALVAI EVLGGALIAR
APSGV