Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_1302 |
Symbol | |
ID | 5711860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009952 |
Strand | + |
Start bp | 1357307 |
End bp | 1357975 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641267214 |
Product | glutathione S-transferase domain protein |
Protein accession | YP_001532645 |
Protein GI | 159043851 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0568234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0901172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCC TGCATCACTG CCCGCAGACC CGGTCCATGC GGACCCTGTG GCTCATCCAG GAGCTGGGGC TGGACGCCGA AATCCGGATC TATCCCTTCG ACAAGACCTT GCGCAGCCCG GAATTCCTGG CCCTGTCGCC CGCGGGCCGG GTGCCCGCCC TGGAGATCGA CGGCGAGGTC ATGGTCGAGA CCGGCGCCAT CACCGAGTAC CTGTGCGAGC GGTTCTCGCC CGACGGGCTG GGCCGCAGCC CCGGCAGCAT GGAGCGGATG GACTGGCTGG TCCTGGTGCA TTTCGCCGAG ACGCTCAGCG CCCATGTGGC GGCCCTGACC CAGCAGCATG TGATGCTCTA CGACGACGCC ATGCGCTCCC CGATCCTGAC CCGGCTGGAG GCGCGGCGGC TGGAGAAATG CTATGCCGCG CTGGAGGCCA GGCTGACCAA GGGGTTCGCG GCGCGCACAC TTCTGGAAAG CGGGTTTTCG GCGGCGGATG TCAGCGTCGG GCAGGCGGTC TACATGGGGC GGCATTTCGC GGCGCTGGAG CCGTATCCGG CGCTGGCGGA CTGGTATGCG CGCATGGCCG AGCGGCCCGC GTTCCAGGCC TCGCTGCCGG AGCCGGGAAC GGGCATCTAT GACCGCGACT TCTATGCGCC GCTGGATGAC CGGCCATGA
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Protein sequence | MIRLHHCPQT RSMRTLWLIQ ELGLDAEIRI YPFDKTLRSP EFLALSPAGR VPALEIDGEV MVETGAITEY LCERFSPDGL GRSPGSMERM DWLVLVHFAE TLSAHVAALT QQHVMLYDDA MRSPILTRLE ARRLEKCYAA LEARLTKGFA ARTLLESGFS AADVSVGQAV YMGRHFAALE PYPALADWYA RMAERPAFQA SLPEPGTGIY DRDFYAPLDD RP
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