Gene Dshi_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1302 
Symbol 
ID5711860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1357307 
End bp1357975 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID641267214 
Productglutathione S-transferase domain protein 
Protein accessionYP_001532645 
Protein GI159043851 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0568234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0901172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCC TGCATCACTG CCCGCAGACC CGGTCCATGC GGACCCTGTG GCTCATCCAG 
GAGCTGGGGC TGGACGCCGA AATCCGGATC TATCCCTTCG ACAAGACCTT GCGCAGCCCG
GAATTCCTGG CCCTGTCGCC CGCGGGCCGG GTGCCCGCCC TGGAGATCGA CGGCGAGGTC
ATGGTCGAGA CCGGCGCCAT CACCGAGTAC CTGTGCGAGC GGTTCTCGCC CGACGGGCTG
GGCCGCAGCC CCGGCAGCAT GGAGCGGATG GACTGGCTGG TCCTGGTGCA TTTCGCCGAG
ACGCTCAGCG CCCATGTGGC GGCCCTGACC CAGCAGCATG TGATGCTCTA CGACGACGCC
ATGCGCTCCC CGATCCTGAC CCGGCTGGAG GCGCGGCGGC TGGAGAAATG CTATGCCGCG
CTGGAGGCCA GGCTGACCAA GGGGTTCGCG GCGCGCACAC TTCTGGAAAG CGGGTTTTCG
GCGGCGGATG TCAGCGTCGG GCAGGCGGTC TACATGGGGC GGCATTTCGC GGCGCTGGAG
CCGTATCCGG CGCTGGCGGA CTGGTATGCG CGCATGGCCG AGCGGCCCGC GTTCCAGGCC
TCGCTGCCGG AGCCGGGAAC GGGCATCTAT GACCGCGACT TCTATGCGCC GCTGGATGAC
CGGCCATGA
 
Protein sequence
MIRLHHCPQT RSMRTLWLIQ ELGLDAEIRI YPFDKTLRSP EFLALSPAGR VPALEIDGEV 
MVETGAITEY LCERFSPDGL GRSPGSMERM DWLVLVHFAE TLSAHVAALT QQHVMLYDDA
MRSPILTRLE ARRLEKCYAA LEARLTKGFA ARTLLESGFS AADVSVGQAV YMGRHFAALE
PYPALADWYA RMAERPAFQA SLPEPGTGIY DRDFYAPLDD RP