| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1281 |
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| Symbol | fdhB |
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| ID | 5711839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 1330881 |
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| End bp | 1332578 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641267193 |
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| Product | respiratory-chain NADH dehydrogenase domain 51 kDa subunit |
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| Protein accession | YP_001532624 |
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| Protein GI | 159043830 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.532683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.302449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGG ATCGAAAATC TGCCACGAAG ACCGGCGTCT GGACATCGGG CGCCGGGCGC
GGCCGCAAGA CCCCCAAGGG CCGGCAGGTC ACCGATCAGG CCTGGGCAGA ACTGCGCGAA
GTGCTGGGCG ACCGGCCGCG GCGGCGCGAC CTGCTGATCG AATTTTTGCA CCTCATCCAG
GACCGCTACG GCCATCTGTC GGCTGCGCAT CTGCGCGCCC TTGCCGAGGA AATGCGCCTG
TCCCAGGCCG AGGTTTACGA GGTCGCGAGT TTCTATGCCC ATTTTGACGT GGTCAAGGAG
GGCGAGAGCC CGCCACCGGC CCTGACCATC CGGGTCTGCG ACTCCCTGTC GTGTGAGCTG
GCCGGGGCGC AGGCGTTGAA ATCTGCGCTG GAGGACGGGC TCGACCCGGG CCAGGTGCGC
GTGCTGCGCG CGCCTTGCAT GGGGCGCTGT GCGACCGCGC CCGTGCTGGA GCTGGGACAT
AACCATATCG ACCACGCCAC CCCGGAAAAG GTGCAGCAGG CCATCGCCGC AAACCACACG
CACCCCACGA TCCCCGACTA TGAAACCCTC GCGGCCTACC GCGCGGAGGG CGGCTATGGT
GTGCTGCGCG ATCTGCGCGC CTCCGGCGAT TGGGAAGTGG TGCAGGCACA AGTAAAGCAA
AGCGGGCTGC GCGGTCTTGG CGGTGCGGGC TTTCCGTCGG GGACCAAGTG GGGCTTCGTG
CGCGCCAATC CCGGGCCGCG TTACCTGGCC GTGAACGGCG ACGAAGGCGA GCCTGGCACC
TTCAAGGACC GCCATTACCT CGAACGGGTG CCGCATCTCT TCCTCGAAGG CATGCTGATC
GCCGCCTGGG CGGTGGAGGC GGAGCGCTGC TACATCTACA TGCGCGACGA ATACCCGGCC
GTGCTCGAAA TCCTGCGCCG GGAGATCGCC GCGCTCGAAG AGGCCGGGAT CGCCGAGCCG
GGTCATATCG AGCTGCGCCG TGGCGCGGGC GCCTATATCT GCGGCGAGGA AAGCGCCATG
ATCGAGAGCA TCGAGGGCAA GCGCGGGATG CCGCGCCACC GCCCGCCCTA CGTGGCGCAG
GTGGGCCTTT TCGGGCGGCC GACGCTGGTG CACAATGTCG AAACCCTGCA CTGGATCGCC
CGCATCTGCC GCGAAGGGCC GGAGGTGCTG AGTGCCACCA CCCATAACGA CCGCGTGGGC
CTGCGCAGCT ATTCGGTCTC GGGCCGGGTC GCGCGGCCGG GGGTCTACCT GCTGCCTGCG
GGCTCCACGA TCCTCGACAT CATCGACGCG GCGGGCGGCA TGGCCGAGGG CCATGTCTTC
AAGGCGTTCC AGCCCGGCGG GCCATCCTCG GGGCTGCTGC CGGCCTCGGC GGCGGATGTG
CCGCTCGATT TCGACACGCT GCAACCTCTG GGCACCTTCA TCGGCTCCGC GGCGGTTGTC
GTTCTGTCGG ACCAGGACCG CGCCCGCGAC GCCGCCCTCA ACATGCTGCG GTTTTTCGAG
GATGAAAGCT GCGGCCAGTG CACCCCGTGC CGGGTCGGCT GCGAAAAGGC CGTCAAACTG
ATGCAGGCCG AGCGCTGGGA TGCCGGGTTG CTGTCCGAGC TTTGCACCGC CATGGCCGAT
GCCTCGATCT GCGGGCTGGG CCAGGCGGCC CCGAACCCGA TCCTGTCCAC GATCAAGCAT
TTCCCAGAGG AGGTCTGA
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| Protein sequence | MALDRKSATK TGVWTSGAGR GRKTPKGRQV TDQAWAELRE VLGDRPRRRD LLIEFLHLIQ
DRYGHLSAAH LRALAEEMRL SQAEVYEVAS FYAHFDVVKE GESPPPALTI RVCDSLSCEL
AGAQALKSAL EDGLDPGQVR VLRAPCMGRC ATAPVLELGH NHIDHATPEK VQQAIAANHT
HPTIPDYETL AAYRAEGGYG VLRDLRASGD WEVVQAQVKQ SGLRGLGGAG FPSGTKWGFV
RANPGPRYLA VNGDEGEPGT FKDRHYLERV PHLFLEGMLI AAWAVEAERC YIYMRDEYPA
VLEILRREIA ALEEAGIAEP GHIELRRGAG AYICGEESAM IESIEGKRGM PRHRPPYVAQ
VGLFGRPTLV HNVETLHWIA RICREGPEVL SATTHNDRVG LRSYSVSGRV ARPGVYLLPA
GSTILDIIDA AGGMAEGHVF KAFQPGGPSS GLLPASAADV PLDFDTLQPL GTFIGSAAVV
VLSDQDRARD AALNMLRFFE DESCGQCTPC RVGCEKAVKL MQAERWDAGL LSELCTAMAD
ASICGLGQAA PNPILSTIKH FPEEV
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