Gene Dshi_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_1252 
Symbol 
ID5711810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009952 
Strand
Start bp1299255 
End bp1299977 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content66% 
IMG OID641267164 
Productprotein of unknown function DUF1045 
Protein accessionYP_001532595 
Protein GI159043801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.429508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.6572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAT ACGTCAGTTT CGCACTCAGT TGCGTGCCCG AACCCGGCAG TGACCTCGCC 
GTGCTCGGCA AGCATTGGTT CGGATGGGAC GTGGACAGCC GCACTGAATC GGCCCTGCTG
AACATCGAAA AACTTCCCCG CGCACCGCTG GCCTTGATCG GACGCCACCG CCGCTTCGGG
TTCCAGGCGC CGATCCTCGC GCCCTTTCGC CTCGCCCGGG GTCACAGCCC GCTCGATCTG
CACCATACCG TCCGTGCGAT CGCGGACTAT TTCGGCCCGA TCAAGCTGCC GGCCCTGCGC
ATGGCGCGCC GCCGGGCGGG TCTGTGTATC GTGCCGCTTC GGGGATCGCC CGAGTTGCGG
CAGGTCGCCA CGACGGTGCG GGGTGTTTTC GACAGGTTTT ACGCGCCGCC AGCGCGATCC
GCCCGCAGTA CTCCGCCCCG CGCTGCGTGC GATATGCCGT CGGAAGCGCC ATTCGAATTG
CAATTCCAGA TCACCGATGG CGTGCTGCCT GAGGAACAGG CGAGGGTGTT TTCGATCCTG
CGTCCGATCA TCGAGCCGAA CCTGCCCCGC CCCTTCGTCA TCCGGTCGCT CACCCTGCTC
GGAGAAGACC AGCACGGCTG GTTCCGAAAG ATCCAACGCT ATCCGCTTGG CGGAACAAGC
CGTGTCCGCG GACTGCAGGA CGATCTTGCG CCGCCGCTCA CCGGAGTGCC ACTGAGCTGG
TAG
 
Protein sequence
MHRYVSFALS CVPEPGSDLA VLGKHWFGWD VDSRTESALL NIEKLPRAPL ALIGRHRRFG 
FQAPILAPFR LARGHSPLDL HHTVRAIADY FGPIKLPALR MARRRAGLCI VPLRGSPELR
QVATTVRGVF DRFYAPPARS ARSTPPRAAC DMPSEAPFEL QFQITDGVLP EEQARVFSIL
RPIIEPNLPR PFVIRSLTLL GEDQHGWFRK IQRYPLGGTS RVRGLQDDLA PPLTGVPLSW