| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_1245 |
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| Symbol | melA |
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| ID | 5711803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | - |
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| Start bp | 1292045 |
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| End bp | 1293385 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641267157 |
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| Product | glycoside hydrolase family 4 |
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| Protein accession | YP_001532588 |
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| Protein GI | 159043794 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.778162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGA TCGCGTTCAT CGGCGCAGGA TCGACCATTT TCATGAAGAA CATCCTCGGC
GATGCCCTGC ATTTCGAGGC CCTGCGCGAC GGCCATTTCG CCCTGATGGA TATCGACCCC
GACCGGCTGG CCGAAAGCGC CGCCGTCGCC CGCGCCATGA TCGCCACCAT GGGCACCGGG
GCCACGATCA GCACCCATGG AGAGCGGCGC GCTGCGCTAG AGGGGGCGGA TTTCGTGGTC
ACCGCCTTCC AGATCGGCGG CTACCAGCCC TGCACCGTGA CGGATTTCGA GATCCCCAAG
GTCTACGGCT TGCGCCAGAC CATCGGCGAC ACGCTCGGCG TTGGCGGCAT CATGCGCGGC
CTGCGCACGG TCCCGCATCT CTGGGCCGTG GCCGAGGATA TGGCGCAGCT CTGCCCGGAC
GCGACGCTGC TGCAATACGT CAACCCCATG GCGATCAACA CCTGGGCGCT GGCCGAACGG
TTCCCGACCC TGCGCCAGGT CGGCCTGTGC CACTCGGTGC AAAACACCGT GCAGGAACTG
GCCCATGACC TCGACCTGCC GCCACATGAG ATCCGCTACC GGGTCGCGGG GGTCAACCAC
GTGGCCTTTT TCCTCGACCT GACCCACCGG GGCCGCGACC TCTATCCGGC GCTGCGGGTG
GGATACGCAG AGGGGCGCCT GCCCAAGCCG CCGCTGCTGA TGCCGCGCTG CGCCAACAAG
GTGCGGTACG AGGTGATGAA TCACCTCGGC TATTTCTGCA CCGAAAGCTC CGAGCATCTG
GCCGAATACG TCCCCTGGTT CATCAAGAAC GGGCGCATGG ATCTGATCGA AACCTACGCC
ATCCCGCTCG ACGAATACCC CACCCGCTGC CTCGAGCAGA TCGCAGACTG GCGCGCCCAG
GCCGAGGCGC TGACCAATGC CGCCCGGATC GACGTGCCCA AGAGCCACGA GTTTGCCGCC
GAGATCATGA ACGCCGTGGT CACCAATACG CCCTACCGGA TCTACGGCAA CTTGGCGAAT
ACCGGCCAGA CCCCGCAACT GCCCCCGGGG GCCGCGGTGG AAACCCCCTG CCTCGTGGAT
GCGAACGGCG TGCAGCCCAC CACCGTCGCC GACATCCCGC CGCAACTGGT CGCACTCATG
CGCAGCCAGA TCAACGTGCA GGAACTTGTG GTCCGCGCGC TGATCGACGA GAATCCAGCG
CATCTCTATC ACGCCGCGAT GATGGACCCC CACACGGCCG CCGAGCTTGA CCTGCGCCAG
ATCCGCAGCC TGGTCACCGA CCTGCTCAAC GCCCATGGCG ACTGGATCCC GGCCTGGGCC
CGCCCCGCCA AGGCCGCCTG A
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| Protein sequence | MTRIAFIGAG STIFMKNILG DALHFEALRD GHFALMDIDP DRLAESAAVA RAMIATMGTG
ATISTHGERR AALEGADFVV TAFQIGGYQP CTVTDFEIPK VYGLRQTIGD TLGVGGIMRG
LRTVPHLWAV AEDMAQLCPD ATLLQYVNPM AINTWALAER FPTLRQVGLC HSVQNTVQEL
AHDLDLPPHE IRYRVAGVNH VAFFLDLTHR GRDLYPALRV GYAEGRLPKP PLLMPRCANK
VRYEVMNHLG YFCTESSEHL AEYVPWFIKN GRMDLIETYA IPLDEYPTRC LEQIADWRAQ
AEALTNAARI DVPKSHEFAA EIMNAVVTNT PYRIYGNLAN TGQTPQLPPG AAVETPCLVD
ANGVQPTTVA DIPPQLVALM RSQINVQELV VRALIDENPA HLYHAAMMDP HTAAELDLRQ
IRSLVTDLLN AHGDWIPAWA RPAKAA
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